Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30232
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    26   1.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.0  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 80  LHHGINESQNNPERCSNVGRVRS 148
           +HHG+N  QN   R +NV +V++
Sbjct: 36  VHHGLNCVQNRQNRFANVVQVKA 58


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 432  FSLTNRLRCNLSNDLRTYICYD 497
            F +TN  R N +++L T  CY+
Sbjct: 3071 FHITNCFRTNSADNLNTITCYE 3092


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,368
Number of Sequences: 2352
Number of extensions: 12610
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)