Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30232
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015950-1|AAV36835.1|  223|Drosophila melanogaster UT01133p pro...    53   4e-07
AE014134-1482|AAF52658.1|  223|Drosophila melanogaster CG13392-P...    53   4e-07

>BT015950-1|AAV36835.1|  223|Drosophila melanogaster UT01133p
           protein.
          Length = 223

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +3

Query: 87  MALMKAKT--IPKDAVTLDELEATNYAWDIVNNWNNKLDIWALRYGPVILGACSA 245
           MAL +AK   +P+DAV + E +A  Y W I+ +W+   ++W+LRY P IL A +A
Sbjct: 1   MALSRAKPDELPRDAVVITEDQALKYQWKIITSWDKIGEVWSLRYTPGILSALAA 55



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = +1

Query: 406 CPICYEMRASALQIGLGVIYPMILGPTSAMMFA 504
           CP+C +MR++A Q  LG++YP IL P +A +FA
Sbjct: 111 CPVCIQMRSAAFQTSLGIVYPTILAPFAAFLFA 143



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +3

Query: 516 TYRVPDLFEGPRVIFKFLSKITKPFMGTIATIAVLQFVTSNVITYFEMKNNFTI 677
           TYR+P + E PR +F    K T+P +  + T+  LQ + +  +T  E K NF +
Sbjct: 148 TYRIPSITENPREVFLLWRKFTRPIVPALGTLIGLQALLTMFLTGQEDKQNFKL 201



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = +2

Query: 260 INRQYRMKLKIGHYGYLSSVIPISVMPGMLTVIYHR 367
           IN  YR KL++G +G LS+ +PI  +P + T++ H+
Sbjct: 61  INNHYRTKLRLGGHGRLSTYLPIVAVPAIFTMLAHK 96


>AE014134-1482|AAF52658.1|  223|Drosophila melanogaster CG13392-PA
           protein.
          Length = 223

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +3

Query: 87  MALMKAKT--IPKDAVTLDELEATNYAWDIVNNWNNKLDIWALRYGPVILGACSA 245
           MAL +AK   +P+DAV + E +A  Y W I+ +W+   ++W+LRY P IL A +A
Sbjct: 1   MALSRAKPDELPRDAVVITEDQALKYQWKIITSWDKIGEVWSLRYTPGILSALAA 55



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 17/33 (51%), Positives = 25/33 (75%)
 Frame = +1

Query: 406 CPICYEMRASALQIGLGVIYPMILGPTSAMMFA 504
           CP+C +MR++A Q  LG++YP IL P +A +FA
Sbjct: 111 CPVCIQMRSAAFQTSLGIVYPTILAPFAAFLFA 143



 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +3

Query: 516 TYRVPDLFEGPRVIFKFLSKITKPFMGTIATIAVLQFVTSNVITYFEMKNNFTI 677
           TYR+P + E PR +F    K T+P +  + T+  LQ + +  +T  E K NF +
Sbjct: 148 TYRIPSITENPREVFLLWRKFTRPIVPALGTLIGLQALLTMFLTGQEDKQNFKL 201



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = +2

Query: 260 INRQYRMKLKIGHYGYLSSVIPISVMPGMLTVIYHR 367
           IN  YR KL++G +G LS+ +PI  +P + T++ H+
Sbjct: 61  INNHYRTKLRLGGHGRLSTYLPIVAVPAIFTMLAHK 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,588,151
Number of Sequences: 53049
Number of extensions: 520904
Number of successful extensions: 1240
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)