Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30231
(550 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 138 6e-32
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 119 4e-26
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 110 2e-23
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 4e-17
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 87 2e-16
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 87 2e-16
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 81 2e-14
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 74 2e-12
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 58 1e-07
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 53 4e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 45 0.001
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 43 0.004
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 41 0.016
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 41 0.016
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 38 0.20
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 37 0.27
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 37 0.35
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 36 0.62
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.82
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 35 1.1
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 35 1.4
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 34 1.9
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 32 7.6
UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;... 32 7.6
UniRef50_A0LBU5 Cluster: Cytochrome-c peroxidase precursor; n=1;... 32 7.6
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 138 bits (335), Expect = 6e-32
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 25 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 204
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 205 QPNSAIRKCVRVQLIKKERK 264
QPNSAIRKCVRVQLIK +K
Sbjct: 61 QPNSAIRKCVRVQLIKNGKK 80
Score = 132 bits (318), Expect = 7e-30
Identities = 62/66 (93%), Positives = 63/66 (95%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEK 434
GKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK K
Sbjct: 78 GKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGK 137
Query: 435 KERPRS 452
KERPRS
Sbjct: 138 KERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 119 bits (287), Expect = 4e-26
Identities = 53/79 (67%), Positives = 66/79 (83%)
Frame = +1
Query: 28 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 207
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 208 PNSAIRKCVRVQLIKKERK 264
PNSAIRKCVRVQLIK +K
Sbjct: 64 PNSAIRKCVRVQLIKNGKK 82
Score = 119 bits (287), Expect = 4e-26
Identities = 55/66 (83%), Positives = 61/66 (92%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEK 434
GKKVTAFVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEK
Sbjct: 80 GKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEK 139
Query: 435 KERPRS 452
KE+PRS
Sbjct: 140 KEKPRS 145
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 110 bits (265), Expect = 2e-23
Identities = 50/78 (64%), Positives = 59/78 (75%)
Frame = +1
Query: 31 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQP 210
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 211 NSAIRKCVRVQLIKKERK 264
NSAI KC RVQL+K +K
Sbjct: 133 NSAICKCARVQLVKNGKK 150
Score = 39.5 bits (88), Expect = 0.050
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEV 323
GKK+ AFVP DGCLN I+EN V
Sbjct: 148 GKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 4e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +3
Query: 315 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 452
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 87.4 bits (207), Expect = 2e-16
Identities = 43/69 (62%), Positives = 48/69 (69%)
Frame = -1
Query: 460 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSR 281
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 280 GTNAVTFFP 254
GT AVTF P
Sbjct: 63 GTKAVTFLP 71
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -3
Query: 281 GDECGHFLSFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 162
G + FL FL++ T TH +AE GCL S P FS+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 87.4 bits (207), Expect = 2e-16
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = +1
Query: 55 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 234
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 235 RVQLIKKERK 264
R+QLIK R+
Sbjct: 69 RIQLIKNGRQ 78
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEVLVAGFG-RKGHAVGDIPGVRFKVVKVANVSLLALYKE 431
G+++TAF P DG +N I+E+DEV + G G R G + GDIPGVRF+V KV +VSL +
Sbjct: 76 GRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAG 135
Query: 432 KKERP 446
K+++P
Sbjct: 136 KRDKP 140
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 80.6 bits (190), Expect = 2e-14
Identities = 38/65 (58%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKE 431
GK VTAFVP DG LN+I E+DEV++ G +G ++GDIPGVRFKV+KV VSL A+++
Sbjct: 81 GKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRG 140
Query: 432 KKERP 446
KK++P
Sbjct: 141 KKQKP 145
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 34 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 213
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 214 SAIRKCVRVQLIK 252
+A+RKCVRVQL+K
Sbjct: 67 AAVRKCVRVQLVK 79
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +1
Query: 34 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 213
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 214 SAIRKCV 234
+A+RKCV
Sbjct: 67 AAVRKCV 73
Score = 73.3 bits (172), Expect = 3e-12
Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKE 431
GK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV VSL A+
Sbjct: 595 GKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKAILLG 654
Query: 432 KKERP 446
KK++P
Sbjct: 655 KKQKP 659
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 58.0 bits (134), Expect = 1e-07
Identities = 31/82 (37%), Positives = 43/82 (52%)
Frame = -2
Query: 255 LLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFT 76
+LNEL+ DA DGR+ L F + ++LC+R T +R+ L VGFL FV P L
Sbjct: 34 VLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVP 93
Query: 75 TVVHVLTRRSYSSGFTHLDSTT 10
+V L S ++ HL T
Sbjct: 94 SVTAELPGSSETTTLAHLAGAT 115
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/77 (36%), Positives = 40/77 (51%)
Frame = -2
Query: 255 LLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFT 76
+LNEL+ DA DGR+ L F + ++LC+R +R+ L VGFL FV P L
Sbjct: 65 VLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVP 124
Query: 75 TVVHVLTRRSYSSGFTH 25
+V L S ++ H
Sbjct: 125 SVTAELPGSSETTTLAH 141
Score = 38.3 bits (85), Expect = 0.12
Identities = 14/31 (45%), Positives = 26/31 (83%)
Frame = -3
Query: 425 VESEERHVGYFYHLKTNSGNVTDGVTFTTES 333
++S++R++GYF HLK +S ++T +TF+T+S
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKS 39
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3
Query: 315 DEVLVAGFGRKGHAVGDIPGVRFKVVK 395
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 139 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
NPF GA AKG+VL+ + + K+PNSA RKCV V+L
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 118
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 43.2 bits (97), Expect = 0.004
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 115 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL 56
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 41.1 bits (92), Expect = 0.016
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 115 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 99
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 41.1 bits (92), Expect = 0.016
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 115 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 37.5 bits (83), Expect = 0.20
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 395
G+ TA++P +G ++++E+ VLV G G K D+PGVR+K+V+
Sbjct: 111 GQMTTAYIPGEG--HNLQEHSVVLVRGGGAK-----DLPGVRYKIVR 150
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 37.1 bits (82), Expect = 0.27
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 115 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
H+ + P G KG+VL+ + + K+PNSA RKCV V+L
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL 103
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 36.7 bits (81), Expect = 0.35
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 401
G +VTA++P +G ++++E+ VLV G GR V D+PGVR+K+++ A
Sbjct: 60 GIEVTAYIPGEG--HNLQEHSIVLVRG-GR----VKDLPGVRYKIIRGA 101
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 127 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
K KA G +G+ + V K+PNSA+RK RV+L
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL 57
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 35.9 bits (79), Expect = 0.62
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 142 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
P G KG+VL+ + + K+PNSA RKC RV+L
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL 96
Score = 33.5 bits (73), Expect = 3.3
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +3
Query: 255 GKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 395
GK+V F+P +G ++++E++ VLV G GR D+PGV+ K+V+
Sbjct: 99 GKEVICFIPGEG--HNLQEHNIVLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 35.5 bits (78), Expect = 0.82
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 151 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
G SH KGIVL+ V K+PNS RKC V+L
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL 103
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 133 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 246
K P G KG+VL + K+PNSA RKC RV+L
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL 85
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 34.7 bits (76), Expect = 1.4
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 58 KHVNHRREQ--RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 231
K H+R Q W K+F K + T+ + G H KG+++ K G + N + +
Sbjct: 26 KITKHKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEK 85
Query: 232 VRVQLIKKERK 264
+++L++ +R+
Sbjct: 86 EKIELVQLKRE 96
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 34.3 bits (75), Expect = 1.9
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +1
Query: 166 KGIVLEKVGVEAKQPNSAIRKCVRVQL 246
+G++L + ++ K+PNSA+RKC RV+L
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL 116
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 32.3 bits (70), Expect = 7.6
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = +3
Query: 258 KKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKK 437
+ V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L KE++
Sbjct: 548 RMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLSKEEQ 606
Query: 438 ERPRS 452
++ S
Sbjct: 607 DKINS 611
>UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, LysR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 315
Score = 32.3 bits (70), Expect = 7.6
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 55 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 207
R+H + W EF A G W ANP G A+ A G+V + KQ
Sbjct: 193 RRHAGALQSLGWG-YEFDAALPGGPWSANPAGEAAQAAGLVTFNAWPQLKQ 242
>UniRef50_A0LBU5 Cluster: Cytochrome-c peroxidase precursor; n=1;
Magnetococcus sp. MC-1|Rep: Cytochrome-c peroxidase
precursor - Magnetococcus sp. (strain MC-1)
Length = 317
Score = 32.3 bits (70), Expect = 7.6
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 237 CTAH*EGKKVTA-FVPRDGCL-NHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVS 410
C+A +G+ V F + G + N+ + EV +A +GR H + FKV + NV+
Sbjct: 207 CSACHQGRGVGGNFYEKMGVMGNYFRDRGEVTLADYGRYNHTRREEHRYEFKVPSLRNVA 266
Query: 411 LLALY 425
L A Y
Sbjct: 267 LTAPY 271
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,143,867
Number of Sequences: 1657284
Number of extensions: 12758313
Number of successful extensions: 30884
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30808
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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