Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30230
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   2.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.4  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 488 CSKGVQYSMKLRTLLWLDSSGPLRKE 565
           CS G+ Y  + R  +W D     + E
Sbjct: 124 CSPGLAYDREARVCMWADQVPECKNE 149


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 488 CSKGVQYSMKLRTLLWLDSSGPLRKE 565
           CS G+ Y  + R  +W D     + E
Sbjct: 124 CSPGLAYDREARVCMWADQVPECKNE 149


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 39  ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 140
           AD  KLV GL    +S  +    N + G  IVAG
Sbjct: 255 ADPGKLVLGLGVYGRSFTLASASNNKLGAPIVAG 288


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 225 VSYRETVAEERTSSVSQSRPTSTTVY 302
           ++YR T   +RT S+S+S+  S + +
Sbjct: 241 LAYRFTQVTDRTQSMSESKNKSESAW 266


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 225 VSYRETVAEERTSSVSQSRPTSTTVY 302
           ++YR T   +RT S+S+S+  S + +
Sbjct: 241 LAYRFTQVTDRTQSMSESKNKSESAW 266


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 225 VSYRETVAEERTSSVSQSRPTSTTVY 302
           ++YR T   +RT S+S+S+  S + +
Sbjct: 241 LAYRFTQVTDRTQSMSESKNKSESAW 266


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 279 DFERQSWSVPQLRSHG 232
           +++ QS  VP++ SHG
Sbjct: 182 EYDEQSLRVPKVNSHG 197


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 207 KKSDPVVSYRETVAEERT-SSVSQSRPTSTTVYS*RLSPCLMVC 335
           +KSD  + Y +   +E T + +S +   +T  Y   L  C +VC
Sbjct: 23  RKSDSGIWYWQCNTDEETCTRISSTVSRNTDTYP-TLETCRLVC 65


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 223 TGSDFLIGMQAWSSSRSLRQISRWS 149
           TG +        + S SLR  SRWS
Sbjct: 345 TGGNSASNSSGDAQSTSLRPFSRWS 369


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 417 TMLPKPVRFGALAPRVPAPT 476
           T  P+P +     PR P PT
Sbjct: 252 TPKPRPTKVSRRKPRPPRPT 271


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 3   PVVRVAVEPKNPADLPKLV 59
           PV+R+ V   NP D   L+
Sbjct: 480 PVMRICVSAWNPKDCDPLI 498


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -3

Query: 505 LNSFGAIHQDVGAGTLGAKAPNLTGFG 425
           +N+    +Q  G   +G  AP+   FG
Sbjct: 330 MNNMAGTYQMTGYSAMGMAAPHHQNFG 356


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 472  GAGTLGAKAPNLTGF 428
            G G+ G+K+P + GF
Sbjct: 1119 GPGSTGSKSPPVAGF 1133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,758
Number of Sequences: 336
Number of extensions: 4086
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)