Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30230
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    28   0.25 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.0  
U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    24   4.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.1  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   4.1  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   9.4  

>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 377 FKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKG-VQYSMKLRTLL 532
           F    +Y  E++  D    R  +C+ P G GP + +    G +Q  + L +LL
Sbjct: 413 FPEPEQYRPERFSPDEVARRDPYCYLPFGEGPRVCIGMRFGSIQAKLGLASLL 465


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 582 NLFSHNSFLSGPLESSHNRVLNFIEY*TPLEQSTRMLGPVPSGPKHQ 442
           NL S+ S LS P  S    +L   ++  P     +  GP+PS  KHQ
Sbjct: 210 NLSSNGSTLSSPSGSRMEYLLPHQQH--PPGAGVQGAGPIPSQQKHQ 254


>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 703 LADMRTKQSSSCWEMIWATTSMDG 632
           L+  RT++SSS W M +   ++DG
Sbjct: 84  LSPSRTRRSSSSWAMEFDEETVDG 107


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 220 GSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIH 101
           G DFL+ +Q    +   RQ  RW +  P  +    SSLIH
Sbjct: 817 GHDFLLAIQEQCVTVIERQQGRWKALKPFDI--EKSSLIH 854


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 220 GSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIH 101
           G DFL+ +Q    +   RQ  RW +  P  +    SSLIH
Sbjct: 818 GHDFLLAIQEQCVTVIERQQGRWKALKPFDI--EKSSLIH 855


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -3

Query: 265 ELVRSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSL 107
           E +   + V+    + + +L   Q  SSS S    S  SS + ++  SPDS L
Sbjct: 84  EPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDSPL 136


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 210 KSDPVVSYRETVAEERTSSVSQSRPTSTT 296
           K   V   + TVA + T++ +  +PT+TT
Sbjct: 110 KKHTVTRTKATVAPKSTTTTTTVKPTTTT 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,835
Number of Sequences: 2352
Number of extensions: 16771
Number of successful extensions: 103
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)