Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30230
(708 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 174 8e-44
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 173 1e-43
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 173 1e-43
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 173 1e-43
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 173 1e-43
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 91 1e-18
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 91 1e-18
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 90 2e-18
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 90 2e-18
BT003756-1|AAO41435.1| 674|Drosophila melanogaster RE71343p pro... 90 3e-18
BT023763-1|AAZ41771.1| 639|Drosophila melanogaster RE37786p pro... 58 9e-09
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 58 9e-09
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 39 0.008
BT011377-1|AAR96169.1| 958|Drosophila melanogaster LP10202p pro... 30 3.5
AY051933-1|AAK93357.1| 739|Drosophila melanogaster LD41490p pro... 30 3.5
AE014297-1897|AAS65152.1| 959|Drosophila melanogaster CG3563-PB... 30 3.5
AE014297-1893|AAF55097.2| 1153|Drosophila melanogaster CG3563-PA... 30 3.5
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 29 6.2
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 29 6.2
AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein. 29 8.2
AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein. 29 8.2
AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein. 29 8.2
AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger re... 29 8.2
AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein. 29 8.2
AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein. 29 8.2
AE014134-1434|AAF52624.1| 287|Drosophila melanogaster CG8292-PA... 29 8.2
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 174 bits (424), Expect = 8e-44
Identities = 88/150 (58%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Frame = +2
Query: 254 TDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEA 433
+DQ+CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEA
Sbjct: 573 SDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGEVSAKDEFKARARYLSEKYDYDVTEA 632
Query: 434 RKIWCFGPEGTGPNILVDCSKGVQYSMKLRTLL-----WLDSSGPLRKE-LWLKRFAWC* 595
RKIWCFGP+GTGPN ++DC+K VQY +++ + W G L E L RF
Sbjct: 633 RKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYD 692
Query: 596 ISTSMM*HFHTDAIHRGGGPNHFPTTRRLL 685
++ H DAIHRGGG PTTRR L
Sbjct: 693 VT------LHADAIHRGGG-QIIPTTRRCL 715
Score = 172 bits (419), Expect = 3e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLE
Sbjct: 489 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLE 548
Query: 183 EDHACIPIKKSDPVVSYRETVAEE 254
EDHACIP+KKSDPVVSYRETV+EE
Sbjct: 549 EDHACIPLKKSDPVVSYRETVSEE 572
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p protein.
Length = 844
Score = 173 bits (422), Expect = 1e-43
Identities = 88/150 (58%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Frame = +2
Query: 254 TDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEA 433
+DQ+CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEA
Sbjct: 573 SDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEA 632
Query: 434 RKIWCFGPEGTGPNILVDCSKGVQYSMKLRTLL-----WLDSSGPLRKE-LWLKRFAWC* 595
RKIWCFGP+GTGPN ++DC+K VQY +++ + W G L E L RF
Sbjct: 633 RKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYD 692
Query: 596 ISTSMM*HFHTDAIHRGGGPNHFPTTRRLL 685
++ H DAIHRGGG PTTRR L
Sbjct: 693 VT------LHADAIHRGGG-QIIPTTRRCL 715
Score = 172 bits (419), Expect = 3e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLE
Sbjct: 489 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLE 548
Query: 183 EDHACIPIKKSDPVVSYRETVAEE 254
EDHACIP+KKSDPVVSYRETV+EE
Sbjct: 549 EDHACIPLKKSDPVVSYRETVSEE 572
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 173 bits (422), Expect = 1e-43
Identities = 88/150 (58%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Frame = +2
Query: 254 TDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEA 433
+DQ+CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEA
Sbjct: 561 SDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEA 620
Query: 434 RKIWCFGPEGTGPNILVDCSKGVQYSMKLRTLL-----WLDSSGPLRKE-LWLKRFAWC* 595
RKIWCFGP+GTGPN ++DC+K VQY +++ + W G L E L RF
Sbjct: 621 RKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYD 680
Query: 596 ISTSMM*HFHTDAIHRGGGPNHFPTTRRLL 685
++ H DAIHRGGG PTTRR L
Sbjct: 681 VT------LHADAIHRGGG-QIIPTTRRCL 703
Score = 172 bits (419), Expect = 3e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLE
Sbjct: 477 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLE 536
Query: 183 EDHACIPIKKSDPVVSYRETVAEE 254
EDHACIP+KKSDPVVSYRETV+EE
Sbjct: 537 EDHACIPLKKSDPVVSYRETVSEE 560
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 173 bits (422), Expect = 1e-43
Identities = 88/150 (58%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Frame = +2
Query: 254 TDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEA 433
+DQ+CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEA
Sbjct: 561 SDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEA 620
Query: 434 RKIWCFGPEGTGPNILVDCSKGVQYSMKLRTLL-----WLDSSGPLRKE-LWLKRFAWC* 595
RKIWCFGP+GTGPN ++DC+K VQY +++ + W G L E L RF
Sbjct: 621 RKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYD 680
Query: 596 ISTSMM*HFHTDAIHRGGGPNHFPTTRRLL 685
++ H DAIHRGGG PTTRR L
Sbjct: 681 VT------LHADAIHRGGG-QIIPTTRRCL 703
Score = 172 bits (419), Expect = 3e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLE
Sbjct: 477 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLE 536
Query: 183 EDHACIPIKKSDPVVSYRETVAEE 254
EDHACIP+KKSDPVVSYRETV+EE
Sbjct: 537 EDHACIPLKKSDPVVSYRETVSEE 560
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 173 bits (422), Expect = 1e-43
Identities = 88/150 (58%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Frame = +2
Query: 254 TDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEA 433
+DQ+CLSKSPNKHNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EKY+YDVTEA
Sbjct: 573 SDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEA 632
Query: 434 RKIWCFGPEGTGPNILVDCSKGVQYSMKLRTLL-----WLDSSGPLRKE-LWLKRFAWC* 595
RKIWCFGP+GTGPN ++DC+K VQY +++ + W G L E L RF
Sbjct: 633 RKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYD 692
Query: 596 ISTSMM*HFHTDAIHRGGGPNHFPTTRRLL 685
++ H DAIHRGGG PTTRR L
Sbjct: 693 VT------LHADAIHRGGG-QIIPTTRRCL 715
Score = 172 bits (419), Expect = 3e-43
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLE
Sbjct: 489 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLE 548
Query: 183 EDHACIPIKKSDPVVSYRETVAEE 254
EDHACIP+KKSDPVVSYRETV+EE
Sbjct: 549 EDHACIPLKKSDPVVSYRETVSEE 572
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p
protein.
Length = 949
Score = 91.5 bits (217), Expect = 1e-18
Identities = 40/86 (46%), Positives = 59/86 (68%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
P++RVA+EP P D+PKLV+GLK L ++D VQ +GEH++ GE+H+E C+ DLE
Sbjct: 503 PILRVAIEPVQPQDMPKLVKGLKLLNQADACVQVSVAPTGEHVITTLGEVHVEKCVHDLE 562
Query: 183 EDHACIPIKKSDPVVSYRETVAEERT 260
+ +A I + S P+VS+RET+ T
Sbjct: 563 QSYAKIKVNVSKPIVSFRETIVPAAT 588
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 91.5 bits (217), Expect = 1e-18
Identities = 40/86 (46%), Positives = 59/86 (68%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
P++RVA+EP P D+PKLV+GLK L ++D VQ +GEH++ GE+H+E C+ DLE
Sbjct: 587 PILRVAIEPVQPQDMPKLVKGLKLLNQADACVQVSVAPTGEHVITTLGEVHVEKCVHDLE 646
Query: 183 EDHACIPIKKSDPVVSYRETVAEERT 260
+ +A I + S P+VS+RET+ T
Sbjct: 647 QSYAKIKVNVSKPIVSFRETIVPAAT 672
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p
protein.
Length = 975
Score = 90.2 bits (214), Expect = 2e-18
Identities = 41/88 (46%), Positives = 67/88 (76%)
Frame = +3
Query: 6 VVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 185
++++AVEP NP++LPK+++GL+++ KS P++ EESGEH++ G GEL+L+ + DL +
Sbjct: 590 IIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRK 649
Query: 186 DHACIPIKKSDPVVSYRETVAEERTSSV 269
++ I IK +DPVV++ ETV E TSS+
Sbjct: 650 MYSEIDIKVADPVVAFCETVVE--TSSL 675
Score = 78.2 bits (184), Expect = 1e-14
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Frame = +2
Query: 266 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 445
C +++PNK N++ M ++P+ GL EDI+ G V + K + Y++D+ AR IW
Sbjct: 677 CFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEFFQVNYDWDLLAARSIW 736
Query: 446 CFGPEGTGPNILVDCSKGVQYSMKLRTLL---------WLDSSGPLRKELWLKRFAWC*I 598
FGP+ TGPNILVD + + L T + W GPL +E ++ + +
Sbjct: 737 AFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREGPLCEEP-IRNVKFKIL 795
Query: 599 STSMM*HFHTDAIHRGGGPNHFPTTRRL 682
+ +A+HRGGG PT RR+
Sbjct: 796 DGVIA----NEALHRGGG-QIIPTARRV 818
Score = 38.3 bits (85), Expect = 0.010
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 502 SVLNEIKDSVVAGFQWAAKEGVMAEEICVVLDFNIYD 612
++L +KDS+V GFQW +EG + EE + F I D
Sbjct: 760 NLLTAVKDSIVQGFQWGTREGPLCEEPIRNVKFKILD 796
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 90.2 bits (214), Expect = 2e-18
Identities = 41/88 (46%), Positives = 67/88 (76%)
Frame = +3
Query: 6 VVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 185
++++AVEP NP++LPK+++GL+++ KS P++ EESGEH++ G GEL+L+ + DL +
Sbjct: 590 IIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRK 649
Query: 186 DHACIPIKKSDPVVSYRETVAEERTSSV 269
++ I IK +DPVV++ ETV E TSS+
Sbjct: 650 MYSEIDIKVADPVVAFCETVVE--TSSL 675
Score = 78.2 bits (184), Expect = 1e-14
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Frame = +2
Query: 266 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 445
C +++PNK N++ M ++P+ GL EDI+ G V + K + Y++D+ AR IW
Sbjct: 677 CFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEFFQVNYDWDLLAARSIW 736
Query: 446 CFGPEGTGPNILVDCSKGVQYSMKLRTLL---------WLDSSGPLRKELWLKRFAWC*I 598
FGP+ TGPNILVD + + L T + W GPL +E ++ + +
Sbjct: 737 AFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREGPLCEEP-IRNVKFKIL 795
Query: 599 STSMM*HFHTDAIHRGGGPNHFPTTRRL 682
+ +A+HRGGG PT RR+
Sbjct: 796 DGVIA----NEALHRGGG-QIIPTARRV 818
Score = 38.3 bits (85), Expect = 0.010
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 502 SVLNEIKDSVVAGFQWAAKEGVMAEEICVVLDFNIYD 612
++L +KDS+V GFQW +EG + EE + F I D
Sbjct: 760 NLLTAVKDSIVQGFQWGTREGPLCEEPIRNVKFKILD 796
>BT003756-1|AAO41435.1| 674|Drosophila melanogaster RE71343p
protein.
Length = 674
Score = 89.8 bits (213), Expect = 3e-18
Identities = 38/82 (46%), Positives = 63/82 (76%)
Frame = +3
Query: 6 VVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 185
++++AVEP NP++LPK+++GL+++ KS P++ EESGEH++ G GEL+L+ + DL +
Sbjct: 590 IIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRK 649
Query: 186 DHACIPIKKSDPVVSYRETVAE 251
++ I IK +DPVV++ ETV E
Sbjct: 650 MYSEIDIKVADPVVAFCETVVE 671
>BT023763-1|AAZ41771.1| 639|Drosophila melanogaster RE37786p
protein.
Length = 639
Score = 58.4 bits (135), Expect = 9e-09
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI-NEESGEHIVAGAGELHLEICLKDL 179
PVV +A++P N D + + R K DP + + E +V+G GELHLEI + +
Sbjct: 443 PVVSMAIKPNNTKDRDNFSKAIARFTKEDPTFHFFFDNDVKETLVSGMGELHLEIYAQRM 502
Query: 180 EEDHACIPIKKSDPVVSYRETV 245
E ++ C P+ P V++RET+
Sbjct: 503 EREYGC-PVTLGKPKVAFRETL 523
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 58.4 bits (135), Expect = 9e-09
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI-NEESGEHIVAGAGELHLEICLKDL 179
PVV +A++P N D + + R K DP + + E +V+G GELHLEI + +
Sbjct: 443 PVVSMAIKPNNTKDRDNFSKAIARFTKEDPTFHFFFDNDVKETLVSGMGELHLEIYAQRM 502
Query: 180 EEDHACIPIKKSDPVVSYRETV 245
E ++ C P+ P V++RET+
Sbjct: 503 EREYGC-PVTLGKPKVAFRETL 523
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 38.7 bits (86), Expect = 0.008
Identities = 19/86 (22%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +3
Query: 18 AVEPKNPADLPKLVEGLKRLAKSDPMVQCINEE-SGEHIVAGAGELHLEICLKDLEEDHA 194
++EP + + + + LK+L + DP ++ + +G+ ++ G GELH++I + ++
Sbjct: 406 SIEPPSVSSQTAMEQALKQLQREDPSLRVSYDSVTGQTVLGGMGELHMDIIKSRILSEYK 465
Query: 195 CIPIKKSDPVVSYRETVAEERTSSVS 272
I + ++Y+ET+ +++S
Sbjct: 466 -IDVDLGPLQIAYKETIEAPALTTLS 490
>BT011377-1|AAR96169.1| 958|Drosophila melanogaster LP10202p
protein.
Length = 958
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 139 PATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTT 5
P + P H + GSD+ R + SLGR G + + TR +
Sbjct: 416 PVVLDQPAQEAFHQSPGSDIPLRKQQQQSLGRLDGIVSTPGTRNS 460
>AY051933-1|AAK93357.1| 739|Drosophila melanogaster LD41490p
protein.
Length = 739
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 139 PATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTT 5
P + P H + GSD+ R + SLGR G + + TR +
Sbjct: 197 PVVLDQPAQEAFHQSPGSDIPLRKQQQQSLGRLDGIVSTPGTRNS 241
>AE014297-1897|AAS65152.1| 959|Drosophila melanogaster CG3563-PB,
isoform B protein.
Length = 959
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 139 PATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTT 5
P + P H + GSD+ R + SLGR G + + TR +
Sbjct: 417 PVVLDQPAQEAFHQSPGSDIPLRKQQQQSLGRLDGIVSTPGTRNS 461
>AE014297-1893|AAF55097.2| 1153|Drosophila melanogaster CG3563-PA,
isoform A protein.
Length = 1153
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 139 PATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTT 5
P + P H + GSD+ R + SLGR G + + TR +
Sbjct: 611 PVVLDQPAQEAFHQSPGSDIPLRKQQQQSLGRLDGIVSTPGTRNS 655
>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
protein.
Length = 2176
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 150 LHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTTVYS*RLSP-CL 326
L + + KD++ +H + + T+A ++S S +R + T S +L+P L
Sbjct: 58 LSVTLAPKDMQRNHLLKMPTATIEKPTITATIASSSSTSTSTTRKSVTATRSLKLNPNIL 117
Query: 327 MVCQRTLMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFG 446
+ R L R +PA+ + +G Q L P FG
Sbjct: 118 LPTLRILARGLLLPALILAILVGSSQAGF-ACLSNPCVFG 156
>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
protein.
Length = 2165
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 150 LHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTTVYS*RLSP-CL 326
L + + KD++ +H + + T+A ++S S +R + T S +L+P L
Sbjct: 47 LSVTLAPKDMQRNHLLKMPTATIEKPTITATIASSSSTSTSTTRKSVTATRSLKLNPNIL 106
Query: 327 MVCQRTLMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFG 446
+ R L R +PA+ + +G Q L P FG
Sbjct: 107 LPTLRILARGLLLPALILAILVGSSQAGF-ACLSNPCVFG 145
>AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 28.7 bits (61), Expect = 8.2
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +3
Query: 165 CLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTTVYS*RLSPCLMVCQRT 344
CL LEE + D + S TV TS+ +S T+TT + S +R
Sbjct: 374 CLNYLEECTKELLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTT---STSTTTTKRP 430
Query: 345 LMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSW 482
A T++ + +T + PKP + P T++
Sbjct: 431 TTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTSTTF 476
>AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 28.7 bits (61), Expect = 8.2
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +3
Query: 165 CLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTTVYS*RLSPCLMVCQRT 344
CL LEE + D + S TV TS+ +S T+TT + S +R
Sbjct: 374 CLNYLEECTKELLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTT---STSTTTTKRP 430
Query: 345 LMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSW 482
A T++ + +T + PKP + P T++
Sbjct: 431 TTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTSTTF 476
>AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 28.7 bits (61), Expect = 8.2
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +3
Query: 165 CLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTTVYS*RLSPCLMVCQRT 344
CL LEE + D + S TV TS+ +S T+TT + S +R
Sbjct: 374 CLNYLEECTKELLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTT---STSTTTTKRP 430
Query: 345 LMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSW 482
A T++ + +T + PKP + P T++
Sbjct: 431 TTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTSTTF 476
>AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger
receptor protein.
Length = 575
Score = 28.7 bits (61), Expect = 8.2
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +3
Query: 165 CLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTTVYS*RLSPCLMVCQRT 344
CL LEE + D + S TV TS+ +S T+TT + S +R
Sbjct: 317 CLNYLEECTKELLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTT---STSTTTTKRP 373
Query: 345 LMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSW 482
A T++ + +T + PKP + P T++
Sbjct: 374 TTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTSTTF 419
>AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 28.7 bits (61), Expect = 8.2
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +3
Query: 165 CLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTTVYS*RLSPCLMVCQRT 344
CL LEE + D + S TV TS+ +S T+TT + S +R
Sbjct: 373 CLNYLEECTKELLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTT---STSTTTTKRP 429
Query: 345 LMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSW 482
A T++ + +T + PKP + P T++
Sbjct: 430 TTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTSTTF 475
>AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 28.7 bits (61), Expect = 8.2
Identities = 25/106 (23%), Positives = 40/106 (37%)
Frame = +3
Query: 165 CLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTTVYS*RLSPCLMVCQRT 344
CL LEE + D + S TV TS+ +S T+TT + S +R
Sbjct: 373 CLNYLEECTKELLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTT---STSTTTTKRP 429
Query: 345 LMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPRVPAPTSW 482
A T++ + +T + PKP + P T++
Sbjct: 430 TTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPMTTTSTTF 475
>AE014134-1434|AAF52624.1| 287|Drosophila melanogaster CG8292-PA
protein.
Length = 287
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 153 HLEICLKDLEEDHACIPIKKSDPVVSYRETVAEERTSSVSQSRPTSTT 296
H LK+L E+ +P+ PVV+ + + S P+STT
Sbjct: 113 HESYVLKELPEEQEILPVTMPTPVVATKLVIDRSEASFSKYLDPSSTT 160
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,055,788
Number of Sequences: 53049
Number of extensions: 788768
Number of successful extensions: 2072
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2059
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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