Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30230
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 166 1e-41
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 166 1e-41
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 84 8e-17
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 84 8e-17
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 2.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 5.7
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 7.5
U55856-3|AAA98022.2| 472|Caenorhabditis elegans Hypothetical pr... 28 7.5
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 28 7.5
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 7.5
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 28 7.5
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 7.5
U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 166 bits (404), Expect = 1e-41
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLE
Sbjct: 497 PVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLE 556
Query: 183 EDHACIPIKKSDPVVSYRETVAEE 254
EDHACIP+KKSDPVVSYRETV E
Sbjct: 557 EDHACIPLKKSDPVVSYRETVQSE 580
Score = 158 bits (384), Expect = 3e-39
Identities = 83/154 (53%), Positives = 102/154 (66%), Gaps = 6/154 (3%)
Frame = +2
Query: 254 TDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEA 433
++Q+CLSKSPNKHNRL AQPMPDGL +DI+ G VN RD+FK RA+ L EKYEYDVTEA
Sbjct: 581 SNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEA 640
Query: 434 RKIWCFGPEGTGPNILVDCSKGVQYSMKLRTLL-----WLDSSGPLRKE-LWLKRFAWC* 595
RKIWCFGP+GTGPN+L+D +KGVQY +++ + W G L E + RF
Sbjct: 641 RKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHD 700
Query: 596 ISTSMM*HFHTDAIHRGGGPNHFPTTRRLLCTHV 697
++ H DAIHRGGG PT RR+ V
Sbjct: 701 VT------LHADAIHRGGG-QIIPTARRVFYASV 727
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +1
Query: 508 LNEIKDSVVAGFQWAAKEGVMAEEICVVLDFNIYDVTL 621
LNEIKDSVVAGFQWA +EGV+++E + FN++DVTL
Sbjct: 666 LNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTL 703
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 166 bits (404), Expect = 1e-41
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLE 182
PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+AGAGELHLEICLKDLE
Sbjct: 497 PVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLE 556
Query: 183 EDHACIPIKKSDPVVSYRETVAEE 254
EDHACIP+KKSDPVVSYRETV E
Sbjct: 557 EDHACIPLKKSDPVVSYRETVQSE 580
Score = 153 bits (370), Expect = 2e-37
Identities = 81/154 (52%), Positives = 101/154 (65%), Gaps = 6/154 (3%)
Frame = +2
Query: 254 TDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEA 433
++Q+CLSKSPNKHNRL AQPMPDGL +DI+ G V+ RD+FK RA+Y EKYEY VTEA
Sbjct: 581 SNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEA 640
Query: 434 RKIWCFGPEGTGPNILVDCSKGVQYSMKLRTLL-----WLDSSGPLRKE-LWLKRFAWC* 595
RKIWCFGP+GTGPN+L+D +KGVQY +++ + W G L E + RF
Sbjct: 641 RKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHD 700
Query: 596 ISTSMM*HFHTDAIHRGGGPNHFPTTRRLLCTHV 697
++ H DAIHRGGG PT RR+ V
Sbjct: 701 VT------LHADAIHRGGG-QIIPTARRVFYASV 727
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +1
Query: 508 LNEIKDSVVAGFQWAAKEGVMAEEICVVLDFNIYDVTL 621
LNEIKDSVVAGFQWA +EGV+++E + FN++DVTL
Sbjct: 666 LNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTL 703
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/84 (44%), Positives = 61/84 (72%)
Frame = +3
Query: 9 VRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEED 188
V++AVEP NP++LPK+++GL+++ KS P++ EESGEH++ G GE +++ + D+ +
Sbjct: 592 VKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKV 651
Query: 189 HACIPIKKSDPVVSYRETVAEERT 260
+ I IK +DPVV++ ETV E T
Sbjct: 652 FSEIDIKVADPVVTFNETVIETST 675
Score = 71.3 bits (167), Expect = 6e-13
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Frame = +2
Query: 266 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 445
C +++PNK N++ M A+P+ L EDI+ V + + + KY +D+ AR IW
Sbjct: 678 CFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIW 737
Query: 446 CFGPEGTGPNILVDCSKGVQYSMKLRTLL---------WLDSSGPLRKELWLKRFAWC*I 598
FGP+ TGPNIL+D + + L + + W GPL +E +++ + +
Sbjct: 738 AFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEP-IRQVKFKLL 796
Query: 599 STSMM*HFHTDAIHRGGGPNHFPTTRR 679
++ T+ ++RGGG PT RR
Sbjct: 797 DAAIA----TEPLYRGGG-QMIPTARR 818
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/84 (44%), Positives = 61/84 (72%)
Frame = +3
Query: 9 VRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEED 188
V++AVEP NP++LPK+++GL+++ KS P++ EESGEH++ G GE +++ + D+ +
Sbjct: 467 VKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKV 526
Query: 189 HACIPIKKSDPVVSYRETVAEERT 260
+ I IK +DPVV++ ETV E T
Sbjct: 527 FSEIDIKVADPVVTFNETVIETST 550
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Frame = +2
Query: 266 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 445
C +++PNK N++ M A+P+ L EDI+ V + + + KY +D+ AR IW
Sbjct: 553 CFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIW 612
Query: 446 CFGPEGTGPNILVDCSKGVQYSMKLRTLL---------WLDSSGPLRKELWLKRFAWC*I 598
FG + TGPNIL+D + + L + + W GPL +E +++ + +
Sbjct: 613 AFGLDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEP-IRQVKFKLL 671
Query: 599 STSMM*HFHTDAIHRGGGPNHFPTTRR 679
++ T+ ++RGGG PT RR
Sbjct: 672 DAAIA----TEPLYRGGG-QMIPTARR 693
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 179
PV+ +A++P N D ++ L R K DP + N+E+ E IV+G GELHLEI + +
Sbjct: 446 PVISMAIKPVNRKDADNFIKALTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRM 505
Query: 180 EEDHACIPIKKSDPVVSYRE 239
+ ++ C P++ P V+YRE
Sbjct: 506 KSEYNC-PVELGKPTVAYRE 524
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/90 (36%), Positives = 52/90 (57%)
Frame = +3
Query: 6 VVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 185
+VRV++ + D+ L E LK LA D ++ + E+GE + AGE+HL+ C+KDL
Sbjct: 477 LVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-N 535
Query: 186 DHACIPIKKSDPVVSYRETVAEERTSSVSQ 275
D + + S+P+V + ETV E+ S Q
Sbjct: 536 DLGLVDLDVSEPIVPFMETVIEDSVLSAPQ 565
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/90 (36%), Positives = 52/90 (57%)
Frame = +3
Query: 6 VVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 185
+VRV++ + D+ L E LK LA D ++ + E+GE + AGE+HL+ C+KDL
Sbjct: 477 LVRVSISTQQLDDMDDLREKLKLLALLDTSLKVMELENGELAMVTAGEVHLQKCIKDL-N 535
Query: 186 DHACIPIKKSDPVVSYRETVAEERTSSVSQ 275
D + + S+P+V + ETV E+ S Q
Sbjct: 536 DLGLVDLDVSEPIVPFMETVIEDSVLSAPQ 565
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 VEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHAC 197
+EP + L + + L+ L + DP ++ + ++G+ IV GELHLE +KD + +
Sbjct: 399 IEPPSNRQLNQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKDRLKRNYK 457
Query: 198 IPIKKSDPVVSYRETVAEE 254
+ + V+YRE + EE
Sbjct: 458 LDVFIGKLQVAYREMLTEE 476
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 100 CTMGSDLARRLRPSTSLGRS 41
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 64 PSTSLGRSAGFLGSTATRTTG 2
PSTS G AGFL STA + G
Sbjct: 142 PSTSSGLPAGFLNSTANSSVG 162
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 305 MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 442
++ P P PE R NP RDD + ++ E+ VTE R I
Sbjct: 87 IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135
>U55856-3|AAA98022.2| 472|Caenorhabditis elegans Hypothetical
protein F31E8.5 protein.
Length = 472
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 458 EGTGPNILVDCSKGVQYSMKLRTLLWLDSSGPLRKELW 571
E T NI V + G M RTLLW D + + +W
Sbjct: 423 ESTSFNIHVIKAPGCDIEMDTRTLLWNDYNAAVPTNMW 460
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 149 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 39
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 154 WSSPAPATMCSPDSSLIHCT 95
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 149 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 39
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 154 WSSPAPATMCSPDSSLIHCT 95
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical
protein F10G2.1 protein.
Length = 201
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 266 CLSKSPNKHNRLFMKAQPMPDGLPEDIDE 352
C K NK++ + P PD + E+ DE
Sbjct: 116 CSEKLENKNSTCYQNWDPFPDAIDEETDE 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,403,164
Number of Sequences: 27780
Number of extensions: 382568
Number of successful extensions: 1118
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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