Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30228
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.6  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 549 NSAYLVFHFLHIGLSSHGLTSR 484
           N+   ++HFLH  L +  LTSR
Sbjct: 98  NTKSFIYHFLHSWLGTGLLTSR 119


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 451 LRLLVSICFQTFFSNSFSFCILFLVTRTK*INVVVIVVFRC 329
           + LL+ +C   F+     FC  F++     + ++ I  F C
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYC 290


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 12  FLTQPCGYLEKVATLKETMAVGDVKTAQGLNDLNQYLA 125
           F+  P    EKV  LKE      V+  Q L+ L+  LA
Sbjct: 231 FVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLA 268


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 12  FLTQPCGYLEKVATLKETMAVGDVKTAQGLNDLNQYLA 125
           F+  P    EKV  LKE      V+  Q L+ L+  LA
Sbjct: 187 FVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLA 224


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 549 NSAYLVFHFLHIGLSSHGLTS 487
           N+   ++HFLH  L +  LTS
Sbjct: 98  NTKSFIYHFLHSWLGTGLLTS 118


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -1

Query: 583 VWRLPREGLPFQ*CVLGFPFPSYRFIIPWLDIKENRGLGNESW 455
           +W  P         +L FP+ S +F IP    + N  L   SW
Sbjct: 71  LWPQPTSVTKISSTLLKFPYRSIKFNIPDEKNEVNDFLREISW 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,825
Number of Sequences: 336
Number of extensions: 3601
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)