Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30227
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    42   4e-06
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    24   1.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   3.3  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   3.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.8  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   7.7  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   7.7  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 42.3 bits (95), Expect = 4e-06
 Identities = 23/70 (32%), Positives = 36/70 (51%)
 Frame = +1

Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKR 531
           EV V+G +   PI  FE +    ++ + VK  GY +PT IQ    P+ +SG+  ++  + 
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQT 204

Query: 532 VPGKTLGLHL 561
             GKT    L
Sbjct: 205 GSGKTAAFML 214


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 7   VDPASERIHSLNKHLQLNPKN 69
           VDP SER+    + L++NP N
Sbjct: 511 VDPDSERMAFWQRILKINPNN 531


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 526 KRVPGKTLGLHLASHCAHK*PKPPIRRGDG 615
           K VPG+T+ L     C +  P      GDG
Sbjct: 503 KEVPGETINLQTCVRCPNNYPWVNDPTGDG 532


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 7   VDPASERIHSLNKHLQLNPKN 69
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 7   VDPASERIHSLNKHLQLNPKN 69
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 225 GRTCDAQIGICFTPTFQQKLL*STSYSSQKIT 320
           GR C++++  C T   Q   + +T ++  K T
Sbjct: 332 GRHCESKVNFCATSPCQNGGVCTTIHAGHKCT 363


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 156 GLATVAIDLEDLEALVGKKNSLEGRTCDA 242
           G+   +I+ +DL A  G KN+L     DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 202 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 44
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -3

Query: 202 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 44
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,319
Number of Sequences: 336
Number of extensions: 4195
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)