Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30227
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 125 3e-29
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 109 2e-24
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 85 5e-17
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 81 7e-16
08_01_0397 - 3509186-3510291,3510322-3512335 81 1e-15
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 74 1e-13
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 73 3e-13
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 71 9e-13
02_01_0381 - 2764331-2764342,2768966-2769907 55 5e-08
06_03_1255 + 28780181-28781172,28782065-28782932 53 2e-07
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 51 8e-07
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 47 1e-05
03_05_0865 - 28365430-28367640 47 1e-05
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 47 2e-05
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 44 2e-04
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 42 5e-04
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 41 0.001
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 38 0.006
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 36 0.025
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 36 0.044
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 35 0.076
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 35 0.076
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 35 0.076
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 34 0.10
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 33 0.18
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 32 0.54
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 31 0.94
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 31 1.2
08_02_1539 - 27690412-27690588,27690694-27690834,27691493-276915... 30 1.6
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 30 1.6
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 30 1.6
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 30 1.6
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 30 2.2
07_01_0762 - 5852168-5852266,5852409-5852569,5852691-5852823 29 2.9
02_03_0219 + 16541350-16541482,16541605-16541765,16541863-165419... 29 2.9
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 29 3.8
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 29 3.8
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 29 5.0
05_04_0179 + 18784011-18784240,18785035-18785119,18785905-187861... 28 6.6
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 6.6
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 28 6.6
10_06_0042 - 10015657-10017840 28 8.7
10_02_0096 - 5248369-5248479,5248562-5248604,5249093-5249178,525... 28 8.7
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 28 8.7
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 28 8.7
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 28 8.7
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 125 bits (302), Expect = 3e-29
Identities = 62/142 (43%), Positives = 85/142 (59%)
Frame = +1
Query: 241 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 420
P+ F SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK*PKPPI 600
Y Q + G+ EPTPIQ+QGWP+A+ G+ + + GKTL +L H +P +
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLS-YLLPGLVHVGAQPRL 224
Query: 601 RRGDGPIALVLALPES*HQQIQ 666
+GDGPI L+LA QIQ
Sbjct: 225 EQGDGPIVLILAPTRELAVQIQ 246
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 109 bits (262), Expect = 2e-24
Identities = 61/154 (39%), Positives = 84/154 (54%)
Frame = +1
Query: 226 AEHATPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEE 405
A+ A L F KNFY P+V + EVE YR + E+TV G +V P++ F +
Sbjct: 36 ADSAAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 406 ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK* 585
FP+YV Q + G+ EPTPIQ+QGWP+A+ G+ + + GKTL +L H
Sbjct: 96 VGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLA-YLLPAIVHVN 154
Query: 586 PKPPIRRGDGPIALVLALPES*HQQIQAKFAARF 687
+P + GDGPI LVLA QIQ + A +F
Sbjct: 155 AQPILAPGDGPIVLVLAPTRELAVQIQQE-ATKF 187
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 85.0 bits (201), Expect = 5e-17
Identities = 44/127 (34%), Positives = 66/127 (51%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PFNK+FY+ P+V S EV +Y + VSG +V PI+ F + FP +
Sbjct: 174 IEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNA 233
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGDG 615
+ GY++PT IQ Q PI +SG+ + K GKT L H +P + + +G
Sbjct: 234 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPM-IVHIMDQPELEKEEG 292
Query: 616 PIALVLA 636
PI +V A
Sbjct: 293 PIGVVCA 299
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 81.4 bits (192), Expect = 7e-16
Identities = 45/127 (35%), Positives = 66/127 (51%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ QPF KN Y + + EV YR E+ V G +V PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGDG 615
+K +G+++P PIQAQ PI MSG+ + K GKTL L H +PP+ GDG
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPM-LRHVKDQPPVVPGDG 358
Query: 616 PIALVLA 636
PI L++A
Sbjct: 359 PIGLIMA 365
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 80.6 bits (190), Expect = 1e-15
Identities = 45/127 (35%), Positives = 67/127 (52%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ QPF KNFY + K + EV YR + E+ V G +V PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGDG 615
+K +G+++P IQAQ PI MSG+ + K GKTL L H +P + GDG
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPM-LRHVKDQPAVVPGDG 497
Query: 616 PIALVLA 636
PI L++A
Sbjct: 498 PIGLIMA 504
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 74.1 bits (174), Expect = 1e-13
Identities = 44/112 (39%), Positives = 57/112 (50%)
Frame = +1
Query: 331 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI 510
E YR KHE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ +
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 511 *LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGDGPIALVLALPES*HQQIQ 666
+A K GKTLG + K + R DGP LVL+ QIQ
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFILLKRLQHNSR--DGPTVLVLSPTRELATQIQ 269
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/102 (42%), Positives = 55/102 (53%)
Frame = +1
Query: 331 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI 510
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ +
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 511 *LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGDGPIALVLA 636
+A K GKTLG L K + R GP LVLA
Sbjct: 190 VVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR--SGPTVLVLA 229
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 70.9 bits (166), Expect = 9e-13
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Frame = +1
Query: 259 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
S++P ++ F P+ P++ + YR HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLAS--HCAHK*PKPPIRRG 609
+ G+ PTPIQAQ WP+A+ + +A K GKTLG + + H P +
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPML--- 675
Query: 610 DGPIALVLALPES*HQQIQAKFAARFLGTHHSLCS*HRGG 729
GP LVLA QIQ + A +F + C+ GG
Sbjct: 676 -GPTVLVLAPTRELASQIQDE-AVKFGRSSRVSCTCLYGG 713
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 55.2 bits (127), Expect = 5e-08
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = +1
Query: 298 PTVLKRSPY-EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 474
P L+R P + +E R K + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 475 AQGWPIAMSGKI*LA*PKRVPGKTL--GLHLASHCAHK*PKPPIRRGDGPIALVL 633
QG P+ +SG+ + GKTL L L + PI G+GP +++
Sbjct: 210 VQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMII 264
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +1
Query: 298 PTVLKRSPYE-VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 474
P L+R P + R + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 475 AQGWPIAMSGKI*LA*PKRVPGKTL--GLHLASHCAHK*PKPPIRRGDGPIALVL 633
QG P+A+SG+ + GKTL L L + PI G+GP L++
Sbjct: 201 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIV 255
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = +1
Query: 325 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
++ R+K ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 505 KI*LA*PKRVPGKTLG--LHLASHCAHK*PKPPIRRGDGPIALVLA 636
+ L GKT + + +HC+H + + GP+A+VLA
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDK-QGPLAIVLA 264
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 340 RNKHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
R K ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 508 I*LA*PKRVPGKTL 549
A GKTL
Sbjct: 185 ECFACAPTGSGKTL 198
>03_05_0865 - 28365430-28367640
Length = 736
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Frame = +1
Query: 337 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*L 516
+R ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + + +
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 517 A*PKRVPGKTLG--LHLASHCAHK*PKPPIRRGDGPIALVLALPES*HQQIQ---AKFAA 681
+ GKT L + S+ P +GP A+V+A QQI+ KFA
Sbjct: 357 GIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAT 416
Query: 682 RFLG 693
+LG
Sbjct: 417 -YLG 419
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRV 534
V VSG +V P FE A + V + V GY+ PTP+Q PIA++G+ +A +
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
Query: 535 PGKT 546
GKT
Sbjct: 132 SGKT 135
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRV 534
V SG +V P+ F E + D + + ++ Y +PTP+Q PI+++G+ +A +
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 284
Query: 535 PGKTLGLHLASHCAHK*PKPPIR-RGDG---PIALVLA 636
GKT +PP R RG P+AL+L+
Sbjct: 285 SGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILS 322
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRV 534
V SG +V P F E + D + + ++ Y +PTP+Q PI+++G+ +A +
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 370
Query: 535 PGKTLG--LHLASHCAHK*PKPPIRRGDG---PIALVLA 636
GKT + S P PP RG P+AL+L+
Sbjct: 371 SGKTAAFCFPIISGIMRSRP-PPRSRGSRTAYPLALILS 408
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +1
Query: 445 MGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGDGPIA 624
MG++ PT IQAQ P+AMSG+ L GKTL + +P + R DG A
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFA 101
Query: 625 LVL 633
LVL
Sbjct: 102 LVL 104
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRV 534
V SG EV P+ F E + + ++ Y PTP+Q PI+++G+ +A +
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
Query: 535 PGKT 546
GKT
Sbjct: 203 SGKT 206
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
FE + V +GV+ GY+ PTPIQ + P+ ++G A + GKT
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKT 77
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 35.5 bits (78), Expect = 0.044
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTL--GLH 558
P+ F P V K G++ P+PIQA WP + G+ + GKT+ G+
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVP 149
Query: 559 LASHCAHK*PKPPIRRGDGPIALVLALPES*HQQI 663
H K + ++G P LVL+ QQI
Sbjct: 150 ALMHVRRKMGEKSAKKG-VPRVLVLSPTRELAQQI 183
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 34.7 bits (76), Expect = 0.076
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
FE+ + G+ G++ P+PIQ + PIA++G LA K GKT
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 198
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 34.7 bits (76), Expect = 0.076
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
FE+ + G+ G++ P+PIQ + PIA++G LA K GKT
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 175
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 34.7 bits (76), Expect = 0.076
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
FE+ + G+ G++ P+PIQ + PIA++G LA K GKT
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 185
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 415 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLA 564
P++V Q + +GY PT +Q Q P+ +SG+ + + GKTL L+
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 98
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F E N + + + +GY++PTPIQA P+A++G+
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
F+E + +++ ++ G + TPIQ + P+ + GK +A K GKT
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKT 134
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 31.1 bits (67), Expect = 0.94
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 436 VKTMGYKEPTPIQAQGWPIAM-SGKI*LA*PKRVPGKTLGLHL 561
V+ +G+KEPTPIQ +P A GK + + GKTL L
Sbjct: 157 VRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 199
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/88 (27%), Positives = 44/88 (50%)
Frame = +1
Query: 301 TVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 480
T +R P +++ E T GVEV I F++ D + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQR 60
Query: 481 GWPIAMSGKI*LA*PKRVPGKTLGLHLA 564
+SG+ +A + GKT + L+
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKTSMISLS 88
>08_02_1539 -
27690412-27690588,27690694-27690834,27691493-27691588,
27691694-27691786,27691909-27692103,27692340-27692438,
27692527-27692753,27692841-27692973
Length = 386
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 514 LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGD--GPIALV 630
L+ P+ +P +G+H CA P+ PIR D G +AL+
Sbjct: 123 LSKPETIPATLVGIHTVIDCATGRPEEPIRTVDWEGKVALI 163
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTL 549
F+E + + G++ GY E + IQ P A+ G+ L K GKTL
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTL 132
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
P + E P+ V MG+KEPT IQA+ P A+ G+ + + GKT
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKT 92
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHL 561
F++ + VK GY+ T +Q P+ + GK LA K GKT+ L
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLL 62
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTL 549
+ FEE + V + MG +PT IQ G P ++G + GKTL
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTL 162
>07_01_0762 - 5852168-5852266,5852409-5852569,5852691-5852823
Length = 130
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 268 VGVKQIPIWASHVLPSREF 212
VGVK+I W + +LPSR+F
Sbjct: 81 VGVKEIESWTARLLPSRQF 99
>02_03_0219 +
16541350-16541482,16541605-16541765,16541863-16541940,
16543176-16543445
Length = 213
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 268 VGVKQIPIWASHVLPSREF 212
VGVK+I W + +LPSR+F
Sbjct: 81 VGVKEIESWTARLLPSRQF 99
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 325 EVEEYRNKHEVTVSGVEVHNPIQYFEEANF--PDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
E EE ++ E+T SG E +P ANF + +++ +K+ G K PIQA + + +
Sbjct: 82 EEEEDDDEGELTASGDE--DPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVL 139
Query: 499 SGKI*LA*PKRVPGKTLGLHL 561
G + + GKTL L
Sbjct: 140 DGHDLVGRARTGQGKTLAFVL 160
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/88 (26%), Positives = 44/88 (50%)
Frame = +1
Query: 301 TVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 480
T +R P +++ E T GVEV I F++ + + +G+ G+++P+ IQ +
Sbjct: 5 TTSRRGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIREDLLRGIYAYGFEKPSAIQQR 60
Query: 481 GWPIAMSGKI*LA*PKRVPGKTLGLHLA 564
+SG+ +A + GKT + L+
Sbjct: 61 AVLPIISGRDVIAQAQSGTGKTSMISLS 88
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTL 549
F + D ++ M Y T IQA+ P M G +A K GKTL
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTL 138
>05_04_0179 +
18784011-18784240,18785035-18785119,18785905-18786102,
18786347-18786527,18787026-18787315,18787583-18787771,
18788316-18788792
Length = 549
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 656 WC*LSGSAKTKAIGPSPLRIGGLGYLCAQWLARCRPNVLPGTRFGY 519
W ++GS+K I P G G LC + R +PG FGY
Sbjct: 123 WYTVAGSSKDVKIDECPPHPGFFGGLCYRCGKRQDEEDVPGVAFGY 168
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 316 SPYEVEEYRNKHEVTVSGVEVHN 384
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLAS--- 567
F E + + ++ M Y T IQA+ P ++GK + K GKTL + +
Sbjct: 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEM 157
Query: 568 -HCAHK*PK 591
H AH P+
Sbjct: 158 LHHAHFMPR 166
>10_06_0042 - 10015657-10017840
Length = 727
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 640 VAPRPKQSDHHLSE*AVWVIYVHNGW 563
VAP K+S H L AVW Y+ GW
Sbjct: 32 VAPTRKRSCHPLPHLAVWSSYLVAGW 57
>10_02_0096 -
5248369-5248479,5248562-5248604,5249093-5249178,
5250089-5250153,5252539-5252747,5253077-5253188,
5253271-5253322,5254593-5254685,5254997-5255146,
5255223-5255327,5255858-5255891,5256145-5256281,
5257691-5257819,5257899-5257977,5258081-5258156,
5258981-5259070,5259181-5259259,5259397-5259431,
5260722-5260811,5260913-5261027
Length = 629
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 453 QRTDAHSSSRLADSYVWKDLVGVAKTGSGQNV 548
+RT H+S+ L ++Y +++G+ GSG V
Sbjct: 501 RRTGGHTSNLLPETYDDTEVIGLTANGSGSRV 532
>08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 233 MRRPDWDLFHSNLSTKTFMIHILQFSKDHH 322
MR PD D S K F IH+ S DHH
Sbjct: 1226 MRSPDDDKPTSWSDQKVFEIHVYPSSNDHH 1255
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 445 MGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHL 561
MG+K PT IQA+ P A+ G+ + + GKT L
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFAL 39
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHL 561
+ +K GY++ T +Q PI + G+ LA K GKT+ L
Sbjct: 87 KAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLL 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,993,208
Number of Sequences: 37544
Number of extensions: 446669
Number of successful extensions: 1182
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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