Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30227
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 79 4e-15
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 75 7e-14
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 69 3e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 52 4e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 45 6e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 45 6e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 45 6e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 8e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 36 0.030
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 36 0.030
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.039
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.039
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 36 0.039
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 35 0.068
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 32 0.37
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 31 0.64
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 31 0.64
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 31 1.1
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 31 1.1
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 31 1.1
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 31 1.1
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 31 1.1
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 31 1.1
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 31 1.1
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.9
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.6
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.4
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 3.4
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.5
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.5
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 29 4.5
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.9
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 28 7.9
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 78.6 bits (185), Expect = 4e-15
Identities = 46/136 (33%), Positives = 74/136 (54%)
Frame = +1
Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 438
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 439 KTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGDGP 618
+++PT IQ+ WPIAMSG+ ++ K GKTL L + H + +RG+GP
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPA-LVHITKQAHRQRGEGP 203
Query: 619 IALVLALPES*HQQIQ 666
LVL QQ+Q
Sbjct: 204 AVLVLLPTRELAQQVQ 219
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 74.5 bits (175), Expect = 7e-14
Identities = 38/126 (30%), Positives = 66/126 (52%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGDG 615
++ Y++PTPIQA P A+SG+ L K GKT +L H +P ++ G+G
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKT-AAYLWPAIVHIMDQPDLKAGEG 338
Query: 616 PIALVL 633
P+A+++
Sbjct: 339 PVAVIV 344
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 69.3 bits (162), Expect = 3e-12
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
V + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTLGLHLASHCAHK*PKPPIRRGD 612
+K Y +PT IQAQ P MSG+ + K GKTL L H +P + GD
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAF-LLPMFRHILDQPELEEGD 376
Query: 613 GPIALVLA 636
GPIA++LA
Sbjct: 377 GPIAVILA 384
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 337 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*L 516
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + + +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 517 A*PKRVPGKTLGLHLASHC-AHK*PKPPIR--RGDGPIALVLALPES*HQQIQ 666
+ GKT L PK + R GP A+++A QQI+
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = +1
Query: 292 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 468
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 469 IQAQGWPIAMSGKI*LA*PKRVPGKTLG--LHLASHCAHK*PKPPIRRGDGPIALVL 633
IQ QG P+A+SG+ + GKT+ L L C + K P R +GP L++
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLII 272
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Frame = +1
Query: 364 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPG 540
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG+ + + G
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 541 KTLG------LHLASHCAHK*PKPPIRRGDGPIALVLALPES*HQQIQAKFAARFLGTHH 702
KTL LH+ + A K + P LVL+ QQI+ + +
Sbjct: 134 KTLAFLLPALLHIDAQLAQY-EKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYK 192
Query: 703 SLC 711
S+C
Sbjct: 193 SVC 195
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 44.8 bits (101), Expect = 6e-05
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Frame = +1
Query: 331 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI 510
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 511 *LA*PKRVPGKTLG--LHLASHCAHK*P---KPPI----RRGDGPIALVLA 636
++ + GKT L + H P KPP RR P ALVL+
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLS 229
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 44.8 bits (101), Expect = 6e-05
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Frame = +1
Query: 331 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI 510
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 511 *LA*PKRVPGKTLG--LHLASHCAHK*P---KPPI----RRGDGPIALVLA 636
++ + GKT L + H P KPP RR P ALVL+
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLS 213
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 44.8 bits (101), Expect = 6e-05
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Frame = +1
Query: 331 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI 510
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 511 *LA*PKRVPGKTLG--LHLASHCAHK*P---KPPI----RRGDGPIALVLA 636
++ + GKT L + H P KPP RR P ALVL+
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLS 210
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRV 534
V +G +V PI F + + +++++ +KT GY PTP+Q P G+ ++ +
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 535 PGKT 546
GKT
Sbjct: 214 SGKT 217
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
P + F +++ P +++ V+ GY TPIQ P+ GK LA + GKT
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKT 349
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
P + F +++ P +++ V+ GY TPIQ P+ GK LA + GKT
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKT 349
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
P + F EAN + +Q+ V GY + TPIQ P+ G +A + GKT
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
P + F EAN + +Q+ V GY + TPIQ P+ G +A + GKT
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
P + F EAN + +Q+ V GY + TPIQ P+ G +A + GKT
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKT 392
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.068
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
FE+ N + + GY +PTPIQ P+A++GK A GKT
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKT 199
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 32.3 bits (70), Expect = 0.37
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVAKTGSGQNVGPTSCQPLCT*ITQTAYSER*WS 617
KDN + +A S D+VG AKTGSG+ + L + + + + WS
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLA------LVIPVLEALWRAK-WS 144
Query: 618 DCFGLGA-----TRELA 653
+GLGA TRELA
Sbjct: 145 PDYGLGALIISPTRELA 161
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 379 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
H +++ V + ++ G+ +PTPIQ + P M GK +A + GKT
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKT 75
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 379 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
H +++ V + ++ G+ +PTPIQ + P M GK +A + GKT
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKT 75
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 271 KVGVKQIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 92
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 91 IPITRHDYFSDLVEDVYLNYGFFLTQ 14
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 271 KVGVKQIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 92
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 91 IPITRHDYFSDLVEDVYLNYGFFLTQ 14
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
F EAN + +++ V GY + TPIQ P+ G +A + GKT
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKT 603
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
F EAN + +++ V GY + TPIQ P+ G +A + GKT
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKT 603
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 271 KVGVKQIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 92
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 91 IPITRHDYFSDLVEDVYLNYGFFLTQ 14
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 271 KVGVKQIPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 92
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 91 IPITRHDYFSDLVEDVYLNYGFFLTQ 14
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
F EAN + +++ V GY + TPIQ P+ G +A + GKT
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKT 603
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 13 PASERIHSLNKHLQLNPKNNHVW 81
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 99 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 215
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +1
Query: 304 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 483
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 484 WPIAMSGKI*LA*PKRVPGKTLGLHL 561
P + LA GKTL L
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFAL 182
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 154 RRIIAEFVASSKFGTTVSTAIIPI 83
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 154 RRIIAEFVASSKFGTTVSTAIIPI 83
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTL 549
FE + +K + P+P+QA+ P+ + G+ L K GKTL
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTL 549
FE + +K + P+P+QA+ P+ + G+ L K GKTL
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTL 74
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -1
Query: 501 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 328
R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -1
Query: 501 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 328
R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKT 546
G+ G+++P+PIQ +A++G+ LA K GKT
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKT 94
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 292 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 450
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 292 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 450
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTL 549
F + ++ Q ++TM K TP+QA P + G L + GKTL
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTL 141
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA*PKRVPGKTL 549
F + ++ Q ++TM K TP+QA P + G L + GKTL
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTL 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,023,201
Number of Sequences: 27780
Number of extensions: 384718
Number of successful extensions: 1183
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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