Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30225
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   4.0  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    24   5.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   7.0  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   9.2  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 625 HSHRFRISLI*CSQIGHDNPQPNQINEKIEDVNQVYVE 512
           H   +  +++ CS+ G+D+  P+QI     D  Q+Y++
Sbjct: 766 HDQSWSSNVVDCSRAGYDDRLPDQIP---MDSTQIYLD 800


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 136 VGVCGELRAVLSIGNVLTMVLHVTSMCCGIKLRTIC 243
           VG C  LR+ LSI NVL    ++T     + +++ C
Sbjct: 39  VGTCVYLRSCLSIRNVLLKKENMTPEDRSLVMKSKC 74


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 186  ENVSN*KNCTQFTTHTHNNSFIVDCIYK 103
            E V N + CT FT   ++ S  +D IYK
Sbjct: 1060 EKVKN-ERCTLFTNCCNHISDAIDAIYK 1086


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 570 LSCPIWEHYIREILNRCECSS 632
           L  P+W+H++R  +  C  +S
Sbjct: 4   LKSPLWQHWLRSSVLPCGTTS 24


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,070
Number of Sequences: 2352
Number of extensions: 18843
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)