Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30224
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   3.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 477 DSHQINFERLNKYLVRVSTYYNL 545
           D HQ +F   NKY + V + Y+L
Sbjct: 124 DGHQHHFLHENKYQLEVDSGYHL 146


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 477 DSHQINFERLNKYLVRVSTYYNL 545
           D HQ +F   NKY + V + Y+L
Sbjct: 124 DGHQHHFLHENKYQLEVDSGYHL 146


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 477 DSHQINFERLNKYLVRVSTYYNL 545
           D HQ +F   NKY + V + Y+L
Sbjct: 124 DGHQHHFLHENKYQLEVDSGYHL 146


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 202 QYVKVPIPQPYPVHVTVDNLSMYLFIRLSTKLLKNQYRTRSKNQCPMKSKSLI 360
           QY++  +   Y V V + NLS +L  R     L    R+   N     S +++
Sbjct: 171 QYLRSTLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTNIV 223


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 202 QYVKVPIPQPYPVHVTVDNLSMYLFIRLSTKLLKNQYRTRSKNQCPMKSKSLI 360
           QY++  +   Y V V + NLS +L  R     L    R+   N     S +++
Sbjct: 331 QYLRSTLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTNIV 383


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 202 QYVKVPIPQPYPVHVTVDNLSMYLFIRLSTKLLKNQYRTRSKNQCPMKSKSLI 360
           QY++  +   Y V V + NLS +L  R     L    R+   N     S +++
Sbjct: 331 QYLRSTLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTNIV 383


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 377  FFDLNGIRLFDFIGHW 330
            + D   +  +DF GHW
Sbjct: 2504 YLDWIAVMTYDFHGHW 2519


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,461
Number of Sequences: 336
Number of extensions: 3870
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)