Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30223
         (715 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   1.2  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.8  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   6.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.8  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 240 LQRDRAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 341
           L+  RA  H+    + D+EPTV         RQL
Sbjct: 234 LEERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 148 PSRHYRSGLR 119
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 211 RWSCLWASGHQAGCRAPGSKAPSRHYR 131
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 211 RWSCLWASGHQAGCRAPGSKAPSRHYR 131
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 211 RWSCLWASGHQAGCRAPGSKAPSRHYR 131
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 647 VCRASNDRQVENLRRGVDG 591
           +C+    R+   LRRG DG
Sbjct: 77  ICKCFCKRRTNTLRRGSDG 95


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 647 VCRASNDRQVENLRRGVDG 591
           +C+    R+   LRRG DG
Sbjct: 525 ICKCFCKRRTNTLRRGSDG 543


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 588 FAIYPAPQVFHLPVVRSPTNFYP 656
           F ++  P ++  P V  P NF P
Sbjct: 445 FKLHRQPHIYPNPDVFDPDNFLP 467


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,140
Number of Sequences: 438
Number of extensions: 5288
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)