Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30222
(710 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 148 1e-34
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 130 4e-29
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 127 3e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 115 1e-24
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 114 2e-24
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 105 1e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 97 4e-19
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 96 9e-19
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 95 2e-18
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 88 2e-16
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 81 3e-14
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 73 9e-12
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 71 3e-11
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 71 4e-11
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 69 2e-10
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 68 2e-10
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 68 3e-10
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 53 8e-06
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 51 2e-05
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 51 2e-05
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 48 2e-04
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 48 2e-04
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 48 2e-04
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 45 0.002
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 44 0.005
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 43 0.006
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 43 0.006
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 43 0.009
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.020
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 42 0.020
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 42 0.020
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 40 0.060
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta... 40 0.080
UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j... 39 0.14
UniRef50_Q2YHP1 Cluster: Monodehydroascorbate reductase; n=1; Pl... 37 0.43
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 37 0.43
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m... 37 0.56
UniRef50_A1SQD2 Cluster: Sensor protein; n=1; Nocardioides sp. J... 35 2.3
UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia japon... 35 2.3
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 4.0
UniRef50_A5D536 Cluster: ABC-type branched-chain amino acid tran... 34 4.0
UniRef50_UPI0000DB6D81 Cluster: PREDICTED: similar to host cell ... 33 5.2
UniRef50_A7RQH6 Cluster: Predicted protein; n=2; Nematostella ve... 33 5.2
UniRef50_Q7N7R8 Cluster: Hypothetical gene; n=1; Photorhabdus lu... 33 6.9
UniRef50_Q6QT76 Cluster: Dinitrogenase reductase; n=1; unculture... 33 6.9
UniRef50_A2SAM5 Cluster: Putative uncharacterized protein; n=3; ... 33 6.9
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 33 6.9
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 9.2
UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_P92004 Cluster: Putative uncharacterized protein tag-26... 33 9.2
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 148 bits (359), Expect = 1e-34
Identities = 68/89 (76%), Positives = 80/89 (89%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
++G++FEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQ
Sbjct: 62 LKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQ 121
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNKDS 508
TLIE ++DVKTTDG++LRVFCIGFT KDS
Sbjct: 122 TLIECSVDVKTTDGFMLRVFCIGFTIKDS 150
Score = 89.4 bits (212), Expect = 8e-17
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +3
Query: 120 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGR
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGR 65
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +1
Query: 508 LSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGIYP 687
+SQRKTCYAQH+Q++ IR KM II R++T+++L+ VV KL+PDSIAK E +YP
Sbjct: 151 MSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAK-DIEKACQVVYP 209
Query: 688 LRDVCIR 708
L DV IR
Sbjct: 210 LHDVYIR 216
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 130 bits (313), Expect = 4e-29
Identities = 60/87 (68%), Positives = 74/87 (85%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
++G++FEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQ
Sbjct: 62 LKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQ 118
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNK 502
T+IEA++DVKTTDGY+LR+FC+GFT K
Sbjct: 119 TMIEAHVDVKTTDGYLLRLFCVGFTKK 145
Score = 81.0 bits (191), Expect = 3e-14
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +3
Query: 120 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGR
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGR 65
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = +1
Query: 517 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGIYPLRD 696
RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI K E IYPL D
Sbjct: 151 RKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK-DIEKACQSIYPLHD 209
Query: 697 VCIR 708
V +R
Sbjct: 210 VFVR 213
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 127 bits (306), Expect = 3e-28
Identities = 63/109 (57%), Positives = 79/109 (72%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
++ ++FE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR +V+KWQ
Sbjct: 456 LKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQ 513
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTLRSEQSERK 568
TLIEA++DVKTTD Y LR+FCI FT K N + + + Q RK
Sbjct: 514 TLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRK 562
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 126 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK R
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHR 459
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/86 (43%), Positives = 54/86 (62%)
Frame = +1
Query: 451 DNRWIRSTCLLHWFHQ*GLLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKL 630
DN +R C+ F + + +KTCYAQ +Q+R IR+KM EI+T T+ +L+E+V K
Sbjct: 526 DNYTLRLFCIA--FTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKF 583
Query: 631 IPDSIAKGHREGPAMGIYPLRDVCIR 708
IP+SI + E IYPL++V IR
Sbjct: 584 IPESIGR-EIEKATSSIYPLQNVYIR 608
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 115 bits (277), Expect = 1e-24
Identities = 59/117 (50%), Positives = 78/117 (66%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
++G+++EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW
Sbjct: 60 LKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWS 117
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTLRSEQSERKCVKSLHAT 592
TLIE +DVKTTDGY LRVF I FT K + + T R + +K V L T
Sbjct: 118 TLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 4/48 (8%)
Frame = +3
Query: 123 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGR 254
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGR
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGR 63
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +1
Query: 490 FHQ*GLLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSI 645
F + G ++KT YA+ ++V+AIRKKM +I+T V++++L+ VV+ LI S+
Sbjct: 141 FTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSL 192
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 114 bits (275), Expect = 2e-24
Identities = 54/95 (56%), Positives = 71/95 (74%)
Frame = +2
Query: 218 GNENCFGRIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 397
G +N ++G+IFEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKL
Sbjct: 53 GMKNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKL 110
Query: 398 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 502
R +V+KWQ+LIEAN+ VKTTD Y+LR+F I T +
Sbjct: 111 RSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKR 145
Score = 63.3 bits (147), Expect = 6e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +3
Query: 126 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGR 64
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +1
Query: 517 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGIYPLRD 696
+KT YA +Q+RAIR+KM EII R+ + L+++ NKLIP+ I + E GIYPL++
Sbjct: 151 KKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGR-EIEKATQGIYPLQN 209
Query: 697 VCIR 708
V IR
Sbjct: 210 VHIR 213
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 105 bits (251), Expect = 1e-21
Identities = 50/128 (39%), Positives = 84/128 (65%)
Frame = +2
Query: 218 GNENCFGRIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 397
GN I+G++ E +LADL+ D ++++RK +L+ + V GRN +F+G+D+T D+L
Sbjct: 55 GNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRL 113
Query: 398 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTLRSEQSERKCVK 577
M++KWQTLIEA +D KT DGY++RVF + FT K S ++++ ST ++ S+ + ++
Sbjct: 114 CSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTS--AGKQSSTSTCYAKSSQVRAIR 171
Query: 578 SLHATSLT 601
T +T
Sbjct: 172 RKINTFIT 179
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +3
Query: 123 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGR
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGR 66
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 502 GLLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGI 681
G S TCYA+ +QVRAIR+K+ IT + + E LI + K E I
Sbjct: 152 GKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTK-KIEKETKNI 210
Query: 682 YPLRDVCIR 708
+PL+++ IR
Sbjct: 211 FPLQNITIR 219
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 97.1 bits (231), Expect = 4e-19
Identities = 46/90 (51%), Positives = 66/90 (73%)
Frame = +2
Query: 239 RIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 418
+++G++ EV+LADL + KF+ E V G++ L FHG+ LTTDKLR +VKKW
Sbjct: 62 QLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLRSIVKKW 119
Query: 419 QTLIEANIDVKTTDGYVLRVFCIGFTNKDS 508
TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 120 CTLIETSVDVKTTDGHLIRIFCIGFTSRKS 149
Score = 63.3 bits (147), Expect = 6e-09
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = +3
Query: 120 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGR
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
Score = 34.3 bits (75), Expect = 3.0
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 517 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKL 630
+KT YA+ Q++ IRK M +IT++ + EL + V+ L
Sbjct: 153 KKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYL 190
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 95.9 bits (228), Expect = 9e-19
Identities = 41/107 (38%), Positives = 63/107 (58%)
Frame = +2
Query: 203 CQPYPGNENCFGRIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDL 382
C G + G++FE +LADL E ++RK R + VQGRN+L FH M++
Sbjct: 49 CNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEV 108
Query: 383 TTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANAR 523
TTDK+ +++KW T +E ++VKT DGY +R+F + FT + +R
Sbjct: 109 TTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSR 155
Score = 56.4 bits (130), Expect = 7e-07
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +3
Query: 126 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GR
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGR 65
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = +2
Query: 308 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 487
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 488 GFTNK 502
FT K
Sbjct: 67 AFTKK 71
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +1
Query: 514 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGIYPLR 693
Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI + A I+PL
Sbjct: 75 QKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQ-DAMNEASSIFPLS 133
Query: 694 DVCIR 708
+R
Sbjct: 134 GALVR 138
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/104 (43%), Positives = 68/104 (65%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
I+G++ E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+ M+KK Q
Sbjct: 59 IKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQ 117
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTLRSE 553
TLIE ++ ++ DGY+LR+F I FT S N +R T RS+
Sbjct: 118 TLIETQVEARSQDGYILRIFVIAFTK--SIKNQQRKTTYAQRSQ 159
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 123 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGR
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/65 (33%), Positives = 42/65 (64%)
Frame = +1
Query: 514 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGIYPLR 693
QRKT YAQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK + I+PL+
Sbjct: 149 QRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKA-TRTIFPLQ 207
Query: 694 DVCIR 708
++ +R
Sbjct: 208 NITLR 212
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 81.0 bits (191), Expect = 3e-14
Identities = 45/95 (47%), Positives = 61/95 (64%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
+ G +FE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK V KWQ
Sbjct: 47 LNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ 103
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARR 526
++EA+ DVKT D Y+L +FC+G+T + AR+
Sbjct: 104 -MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQ 137
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3
Query: 138 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKG 251
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNG 49
Score = 41.1 bits (92), Expect = 0.026
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 517 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGIYPLRD 696
R+ AQ+ QV I +I+ D ++L+EV+NKL+PD++ K E IYPL D
Sbjct: 136 RQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGK-DVEKACQFIYPLHD 192
Query: 697 VCIR 708
V +R
Sbjct: 193 VFVR 196
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 72.5 bits (170), Expect = 9e-12
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +2
Query: 245 EGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 424
+G++FEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+DLT+DK+ ++K
Sbjct: 60 DGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMM 116
Query: 425 LIEANIDVKTTD 460
I +V+T D
Sbjct: 117 EIMTR-EVQTND 127
Score = 70.9 bits (166), Expect = 3e-11
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +3
Query: 120 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEG 242
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+G
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASDG 61
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +1
Query: 556 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGIYPLRDVCIR 708
IRKKM EI+TR+V ++L+EVVNKLIPDSI K E IYPL DV +R
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK-DVEKACQSIYPLHDVFVR 160
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +3
Query: 123 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKG 251
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKG 64
Score = 52.4 bits (120), Expect = 1e-05
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 391
++G +FE+SLADLQ D E +FRKF+LI E VQG+ L NF M L+ D
Sbjct: 62 LKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 70.5 bits (165), Expect = 4e-11
Identities = 38/114 (33%), Positives = 66/114 (57%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
+ +++E+S AD+ D +R IA G V F GM LT DKL +++K++
Sbjct: 58 VNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDSIMRKYR 114
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTLRSEQSERKCVKSL 583
T+I+A++D KT DG++LR+F IGFT K + ++ ++ ++ Q +K+L
Sbjct: 115 TMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/93 (38%), Positives = 54/93 (58%)
Frame = +2
Query: 224 ENCFGRIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 403
+N + + G+ ++V+ ADL + D RKF ++G + F GM+LT+DK +
Sbjct: 7 KNSYMNMIGRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKA 64
Query: 404 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 502
M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 65 MIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRR 97
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/64 (29%), Positives = 41/64 (64%)
Frame = +1
Query: 517 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKGHREGPAMGIYPLRD 696
+KTCY +H+ + IRK M ++I +++ ++++++ KL +++ K E I+PL++
Sbjct: 103 KKTCYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGK-RIEELGSEIFPLQN 161
Query: 697 VCIR 708
C+R
Sbjct: 162 CCVR 165
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
I +++EV+L DL + KF L + V L NFHGMD+T K + +K
Sbjct: 59 INHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGC 118
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNK 502
I+ +D+ TTDGY+LRVF I FT++
Sbjct: 119 DCIDVFMDIPTTDGYLLRVFVIAFTDR 145
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3
Query: 126 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGR 254
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + R
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHR 62
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/96 (37%), Positives = 53/96 (55%)
Frame = +2
Query: 215 PGNENCFGRIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 394
P +EN ++ KI++VSLAD+ E S F + + FHG+ LT DK
Sbjct: 50 PADEN--SSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDK 105
Query: 395 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 502
+ ++KKW TLIE ++ KT DGY L++F I + K
Sbjct: 106 ICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKK 141
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/103 (29%), Positives = 52/103 (50%)
Frame = +2
Query: 239 RIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 418
++ G+ E +LA+L D + +++K V G N F +LT + L + ++
Sbjct: 43 KVVGRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRR 102
Query: 419 QTLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTLR 547
+ IE +DV T DGY LRV + FT + + +RA + +R
Sbjct: 103 TSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIMR 145
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/89 (33%), Positives = 50/89 (56%)
Frame = +2
Query: 236 GRIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 415
G++ G++ E +L D+ D + FR+ E + G + +F G +LT D +R +VK+
Sbjct: 40 GKMIGRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKR 97
Query: 416 WQTLIEANIDVKTTDGYVLRVFCIGFTNK 502
+ I+AN+ V T DG+ +RV I T K
Sbjct: 98 RTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 33.9 bits (74), Expect = 4.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 123 VDPFTRKDWYDVKAPSMFSKRQVGTTLVN 209
VD F K+WY V AP+ F++ +G TL +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +2
Query: 251 KIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 430
+ EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 431 EANIDVKTTDGYVLRVFCIGFT 496
A +VKT DG V+R+ +G T
Sbjct: 113 TAITEVKTKDGMVMRIAVLGIT 134
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +2
Query: 239 RIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 418
++ G++ E +L DL + F++ VQG N F G D+TTD +R M+++
Sbjct: 46 KVIGRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRR 103
Query: 419 QTLIEANIDVKTTDGYVLRV 478
++ I+ +V+T+DGY +RV
Sbjct: 104 RSRIDMIFNVETSDGYRMRV 123
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 48.0 bits (109), Expect = 2e-04
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +2
Query: 248 GKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 427
G+ E ++ +L D ++ K L V G + G +LTTD +R +VK+ +
Sbjct: 45 GRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSR 102
Query: 428 IEANIDVKTTDGYVLRVFCIGFTNK 502
I+AN+DV+T DG+V+RV FT K
Sbjct: 103 IDANVDVRTKDGFVIRVKPTCFTIK 127
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +2
Query: 239 RIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 418
++ G++ E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 35 KVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRRG 92
Query: 419 QTLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTLRS--EQSERKC 571
+ I+ IDV T DGY +RV + FT + + + +RA + E++ ++C
Sbjct: 93 TSRIDGVIDVVTKDGYKVRVAGLAFTTRRAKTSQQRAIRKEMFKVIEENAKEC 145
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +2
Query: 248 GKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 427
G+I E+SL DL + + F++ + V G N F G D T + L+ V++ ++
Sbjct: 51 GRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRRSK 108
Query: 428 IEANIDVKTTDGYVLRVFCIGFT 496
I A ++V+T DG+ +RV + T
Sbjct: 109 INAIVEVRTKDGFKVRVKALVLT 131
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = -1
Query: 269 GKLRKSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFFTAL 90
G L+ S L+ FR + S + +K A++ AE RR L+++P+ S+ V LLL++ F L
Sbjct: 85 GNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF-PL 143
Query: 89 RQAFIFP 69
+FP
Sbjct: 144 GNPLVFP 150
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +2
Query: 239 RIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 418
++ G+ +L +L D+ A + F++ V F +LT D LR +V++
Sbjct: 39 QVVGRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRG 96
Query: 419 QTLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRA 529
+ +EA+I V TTD Y +RV + T K + + +A
Sbjct: 97 ASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEKA 133
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/102 (26%), Positives = 50/102 (49%)
Frame = +2
Query: 239 RIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 418
++ G+ E +L +L D + F++ V + F +LT D LR +V++
Sbjct: 39 KVLGRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRG 96
Query: 419 QTLIEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTL 544
+ +EA I V TTD Y +++ + T K + A+ +A T+
Sbjct: 97 SSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEKAIRRTM 138
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
I G+I+E++ + D +FR ++E V G++ L F G T+ +R +++++
Sbjct: 54 IIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYR 111
Query: 422 TLIEANIDVKTTDGYVLRVFCIGFTNK 502
I+ IDV T DGY++R+ + T K
Sbjct: 112 GKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.020
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 120 IVDPFTRKDWYDVKAPSMFSKRQVGTT 200
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 41.5 bits (93), Expect = 0.020
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +2
Query: 248 GKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 427
G+ E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 428 IEANIDVKTTDGYVLRVFCIGFT 496
I +D+ T DG+ LRV + T
Sbjct: 108 INKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 41.5 bits (93), Expect = 0.020
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +2
Query: 239 RIEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKW 418
++ G++ E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 39 KLIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRK 96
Query: 419 QTLIEANIDVKTTDGYVLRVFCIGFTNK 502
+ + +V T DGY LRV + FT +
Sbjct: 97 SSKVTGIFNVWTKDGYGLRVTAMAFTRQ 124
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 39.9 bits (89), Expect = 0.060
Identities = 21/84 (25%), Positives = 45/84 (53%)
Frame = +2
Query: 245 EGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 424
+G++ EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 425 LIEANIDVKTTDGYVLRVFCIGFT 496
+ +DVKT+DGYV R+ + T
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALT 125
>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
Plantago major|Rep: Plasma memebrane H+-ATPase -
Plantago major (Common plantain)
Length = 106
Score = 39.5 bits (88), Expect = 0.080
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1
Query: 4 AQPRWRXALELVDPPGCRNSARG 72
+ P ALELVDPPGCRNSARG
Sbjct: 3 SSPAVAAALELVDPPGCRNSARG 25
>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09205 protein - Schistosoma
japonicum (Blood fluke)
Length = 215
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 25 ALELVDPPGCRNSARG 72
ALELVDPPGCRNSARG
Sbjct: 10 ALELVDPPGCRNSARG 25
>UniRef50_Q2YHP1 Cluster: Monodehydroascorbate reductase; n=1;
Plantago major|Rep: Monodehydroascorbate reductase -
Plantago major (Common plantain)
Length = 151
Score = 37.1 bits (82), Expect = 0.43
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 24 RSRTSGSPGLQEFGTR 71
RSRTSGSPGLQEFGTR
Sbjct: 10 RSRTSGSPGLQEFGTR 25
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 37.1 bits (82), Expect = 0.43
Identities = 26/111 (23%), Positives = 52/111 (46%)
Frame = +2
Query: 248 GKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 427
G+ EV++ +L D + + K R + V G F G TTD +R M+++ +
Sbjct: 46 GRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSR 103
Query: 428 IEANIDVKTTDGYVLRVFCIGFTNKDS*ANARRATPSTLRSEQSERKCVKS 580
I+A+ VKT D +++ + T + + ++ ++ + +E KS
Sbjct: 104 IDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQKYMRQVINDLLAETAAEKS 154
>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
melanogaster|Rep: Elastin like protein - Drosophila
melanogaster (Fruit fly)
Length = 110
Score = 36.7 bits (81), Expect = 0.56
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 25 ALELVDPPGCRNSARGK 75
ALELVDPPGCRNSAR +
Sbjct: 9 ALELVDPPGCRNSARDR 25
>UniRef50_A1SQD2 Cluster: Sensor protein; n=1; Nocardioides sp.
JS614|Rep: Sensor protein - Nocardioides sp. (strain
BAA-499 / JS614)
Length = 471
Score = 34.7 bits (76), Expect = 2.3
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -1
Query: 296 RQCQLVDQPGKLRKSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIV 150
RQ QLV G ++ L S R+N LG D+ G DLP LD V
Sbjct: 244 RQRQLVADAGHELRTPLTSLRTNLDLLGQADRGGVDLPSEARAELLDDV 292
>UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia
japonica|Rep: HMG protein TCF/LEF - Dugesia japonica
(Planarian)
Length = 263
Score = 34.7 bits (76), Expect = 2.3
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 31 ELVDPPGCRNSARGK 75
+LVDPPGCRNSARG+
Sbjct: 5 QLVDPPGCRNSARGE 19
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 4.0
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -3
Query: 444 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 280
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_A5D536 Cluster: ABC-type branched-chain amino acid
transport systems, periplasmic component; n=2;
Bacteria|Rep: ABC-type branched-chain amino acid
transport systems, periplasmic component - Pelotomaculum
thermopropionicum SI
Length = 407
Score = 33.9 bits (74), Expect = 4.0
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 155 CQGSVYVQQEASRHHACQPYPGNENCFGRIEGKIFEVSLADLQADTDAERSFRKFRLIAE 334
C G ++E + P G+E FG +E FE++L +L+A A ++ +L+ E
Sbjct: 25 CGGGQGAKKEEVKVGVILPLTGSEAMFGEMEKNSFEMALEELKAAGKAAIGGKEIKLLFE 84
Query: 335 YVQGR 349
QG+
Sbjct: 85 DDQGK 89
>UniRef50_UPI0000DB6D81 Cluster: PREDICTED: similar to host cell
factor C1; n=1; Apis mellifera|Rep: PREDICTED: similar
to host cell factor C1 - Apis mellifera
Length = 1550
Score = 33.5 bits (73), Expect = 5.2
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +3
Query: 327 SPNMCKDVMCSATSTAWTSQPISSGGWLKNGRLSSKPTLM*RQPMDTFYVSSALVSPIRT 506
+P ++ AT +A TS P++S L S +P++ P V S + SPI+
Sbjct: 408 TPTTTSTMVTLATDSA-TSSPVTSVPELPQTPTSVRPSV---PPQTPVRVQSTVQSPIQK 463
Query: 507 PEPTQDVLRPA 539
P P+Q V +P+
Sbjct: 464 PVPSQSVTKPS 474
>UniRef50_A7RQH6 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 343
Score = 33.5 bits (73), Expect = 5.2
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = -3
Query: 612 PEFRVSDVACNDFTH-FLSDCSDL-SVLGVARLALAQESLLVKPMQKTRRTYPSVVFTSM 439
P R D C FTH + S L S+ + +++ + LVKPMQ RR V+ ++
Sbjct: 85 PAGRSGDWICKFFTHNAIMQISVLTSIFTLTIVSVERYHALVKPMQVGRRLTEDTVWYAV 144
Query: 438 LASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASV 289
+AS LT+ +++ K T + CT + + +++LS V
Sbjct: 145 IASWTASFILTVPSFVAI------KFDETRKACT-GPFDFHTQENLSYMV 187
>UniRef50_Q7N7R8 Cluster: Hypothetical gene; n=1; Photorhabdus
luminescens subsp. laumondii|Rep: Hypothetical gene -
Photorhabdus luminescens subsp. laumondii
Length = 117
Score = 33.1 bits (72), Expect = 6.9
Identities = 15/68 (22%), Positives = 36/68 (52%)
Frame = -3
Query: 522 LALAQESLLVKPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP 343
L + +SL+ P+ +TRR +P+ F S+ ++ + +HL + V + + ++
Sbjct: 20 LLIRHDSLIFAPVLQTRRNHPTPHFPSITVWLKFTKLVQVHLLHTCVLPLSRSRDTFIQR 79
Query: 342 CTYSAINL 319
C+ +++ L
Sbjct: 80 CSRASVTL 87
>UniRef50_Q6QT76 Cluster: Dinitrogenase reductase; n=1; uncultured
bacterium|Rep: Dinitrogenase reductase - uncultured
bacterium
Length = 121
Score = 33.1 bits (72), Expect = 6.9
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -3
Query: 381 RSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARETSKIFPSILP 235
RS WK + P T+ ++ LSA+VS CRS +E K F S +P
Sbjct: 69 RSTSWK-KMVHTPRTWILYSMMFSATLSAAVSLCRSVKEKQKKFISSVP 116
>UniRef50_A2SAM5 Cluster: Putative uncharacterized protein; n=3;
Burkholderia mallei|Rep: Putative uncharacterized
protein - Burkholderia mallei (strain NCTC 10229)
Length = 188
Score = 33.1 bits (72), Expect = 6.9
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 161 GSVYVQQEASRHHACQPYPGNENCFGRIEGKIFEVSLADLQADTDAERSFRKFRLIAEYV 340
G+V +QQ+A RH A + GN+N ++ + ++A+ Q +T AE + ++ ++
Sbjct: 99 GTVALQQQAIRHLAIEVLAGNKNLPMEVKAWPVDAAVAEQQRNTQAELVQNQREMMGDFK 158
Query: 341 Q 343
Q
Sbjct: 159 Q 159
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 33.1 bits (72), Expect = 6.9
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +2
Query: 242 IEGKIFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 421
+ G++ VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 45 VPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKKRA 102
Query: 422 TLIEANIDV 448
+ +++ I V
Sbjct: 103 SRVDSTITV 111
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 9.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 375 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 500
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 89
Score = 32.7 bits (71), Expect = 9.2
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 25 ALELVDPPGCRNS 63
ALELVDPPGCRNS
Sbjct: 16 ALELVDPPGCRNS 28
>UniRef50_P92004 Cluster: Putative uncharacterized protein tag-260;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein tag-260 - Caenorhabditis elegans
Length = 457
Score = 32.7 bits (71), Expect = 9.2
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 438 TLM*RQPMDTFYVSSA----LVSPIRTPEPTQDVLRPAHSGQSNQKENV*NH 581
TL +QP+ T V+SA +SP RTP+PT P H N E V H
Sbjct: 144 TLTQQQPLQTLPVTSANGIGRISPQRTPQPTVLPTSPFHVPTMNNLEQVLTH 195
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,636,589
Number of Sequences: 1657284
Number of extensions: 15364854
Number of successful extensions: 43018
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 41415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42991
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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