Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30222
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    25   0.93 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   5.0  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   6.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.6  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   8.7  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   8.7  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   8.7  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 77  IFPRAEFLQPGGSTSSR 27
           I+ + EFL PGGS   R
Sbjct: 64  IYAKCEFLNPGGSVKDR 80


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = -1

Query: 131 WVDNLLLNTFFTALRQAFIF--PRAEFLQP 48
           +++++ LNT++  LRQAF F  P  E+  P
Sbjct: 223 FIEDIGLNTYYFFLRQAFPFWLPSKEYDLP 252


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = -1

Query: 131 WVDNLLLNTFFTALRQAFIF--PRAEFLQP 48
           +++++ LNT++  LRQAF F  P  E+  P
Sbjct: 223 FIEDIGLNTYYFFLRQAFPFWLPSKEYDLP 252


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +2

Query: 158 QGSVYVQQEASRHH--ACQPYPGNENCFG 238
           Q S+Y+QQ+  +HH  +   +  N+  FG
Sbjct: 94  QHSLYLQQQQQQHHQDSSSEHASNQERFG 122


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 321 LNLRKDLSASVSACRSARE 265
           LNLR D+S+S S+  S+ E
Sbjct: 365 LNLRTDISSSSSSISSSEE 383


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/50 (22%), Positives = 22/50 (44%)
 Frame = +1

Query: 448 EDNRWIRSTCLLHWFHQ*GLLSQRKTCYAQHTQVRAIRKKMCEIITRDVT 597
           ED+ WI +   + +  Q G       C +   +V  + K + +I+   +T
Sbjct: 29  EDSNWIITNSFIIFTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLT 78


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 93  PSTGLYFSSCRIPAARGIH 37
           PST + ++SC++ AA   H
Sbjct: 132 PSTPIVYASCKLQAAAVDH 150


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 7   QPRWRXALELVDPPGC 54
           + RW    E VDP GC
Sbjct: 392 EDRWFTYQETVDPAGC 407


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 706 GCKHRAEGRC 677
           GC  R EGRC
Sbjct: 132 GCGERTEGRC 141


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 706 GCKHRAEGRC 677
           GC  R EGRC
Sbjct: 137 GCGERTEGRC 146


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 706 GCKHRAEGRC 677
           GC  R EGRC
Sbjct: 137 GCGERTEGRC 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,471
Number of Sequences: 438
Number of extensions: 4452
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)