Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30221
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical pr... 31 0.62
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 31 0.82
Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical pr... 29 1.9
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 29 3.3
Z81512-5|CAI79169.1| 417|Caenorhabditis elegans Hypothetical pr... 28 4.4
U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchanger... 28 5.8
U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchanger... 28 5.8
U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchanger... 28 5.8
AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calciu... 28 5.8
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 27 7.7
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 27 7.7
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 27 7.7
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 27 7.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 7.7
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 7.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 7.7
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 242 EGTGTLQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 415
EG L++L K G KY G ++T+ADLS+ + S ++D Y V R ET+
Sbjct: 137 EGLTALEILLKQHSG-KYAVGDDVTIADLSIPPLIYSANRFNLDLSPYPTVNRINETL 193
>Z80217-4|CAB02290.1| 213|Caenorhabditis elegans Hypothetical
protein F37B1.4 protein.
Length = 213
Score = 31.1 bits (67), Expect = 0.62
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Frame = +2
Query: 263 LLDKFLEGQK--YVAGPNLTVADLSLIASVSSLE---ASDIDFKKYANVKRWYETVKST 424
LL++ L+ K Y+ G LT ADL + ++ SLE A D D + + N+K++ E + T
Sbjct: 140 LLNRILKKSKSGYLVGDGLTWADLVIADNLHSLEKLRAIDDDDEGHQNLKKYKEKIYGT 198
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 30.7 bits (66), Expect = 0.82
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 290 KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKR 400
KY G LT+AD++L + + + + +D KY + R
Sbjct: 152 KYCVGDQLTIADINLPSIIYNAKIYKVDMSKYPTITR 188
>Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical
protein Y57G11A.1b protein.
Length = 500
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 323 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 484
D ++I E +++F+ ++K +W E TA + A K LEA KG V+
Sbjct: 78 DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 323 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 484
D ++I E +++F+ ++K +W E TA + A K LEA KG V+
Sbjct: 78 DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132
>U23173-1|AAC46708.1| 221|Caenorhabditis elegans Hypothetical
protein K07E1.1 protein.
Length = 221
Score = 29.5 bits (63), Expect = 1.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 40 PCGSPRKVHHMLKTHRVEPEE 102
PCG PR HH+ ++ P+E
Sbjct: 74 PCGDPRLPHHLFPPKKITPDE 94
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 362 SDIDFKKYANVKRWYETVKSTAPGYQEA-NEKGLEAFKGLVNSMLKK 499
+D+D KK N+K Y+ K+ EA EK +++ K ++ +L K
Sbjct: 923 NDVDLKKQENIKEGYKKRKAEEMAESEAKREKSIKSRKKDISRVLSK 969
>Z81512-5|CAI79169.1| 417|Caenorhabditis elegans Hypothetical
protein F25C8.5 protein.
Length = 417
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 55 RKVHHMLKTHRVEPEERGQEQEVHADRYLVPNSARAELCTRD 180
R ++HM+ +E + G E EV L+ NS ELC D
Sbjct: 351 RILNHMIDVLDIEKKLIGNENEVGGFDLLIKNSKPVELCKVD 392
>U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformd protein.
Length = 950
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 379 LEVNVRGFQAGDTGDETQVG 320
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchangers
protein 2, isoforma protein.
Length = 975
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 379 LEVNVRGFQAGDTGDETQVG 320
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformb protein.
Length = 925
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 379 LEVNVRGFQAGDTGDETQVG 320
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 925
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 379 LEVNVRGFQAGDTGDETQVG 320
+EV RGF+AGD G T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2
Query: 367 VRGFQAGDTGDETQVGDGEVRSGHVLLTFEELVQQLKGSCTFSFLALSAGAP 212
VRG DTGD ++ G G ++ E + + + +F A+ A AP
Sbjct: 129 VRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAP 180
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 52 PRKVHHMLKTHRVEPEERGQEQEVHADRY 138
P + H + H +P+ +GQ Q + D+Y
Sbjct: 359 PNQAAHDSRRHEQQPQHQGQPQRIPVDQY 387
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 52 PRKVHHMLKTHRVEPEERGQEQEVHADRY 138
P + H + H +P+ +GQ Q + D+Y
Sbjct: 323 PNQAAHDSRRHEQQPQHQGQPQRIPVDQY 351
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 52 PRKVHHMLKTHRVEPEERGQEQEVHADRY 138
P + H + H +P+ +GQ Q + D+Y
Sbjct: 326 PNQAAHDSRRHEQQPQHQGQPQRIPVDQY 354
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 52 PRKVHHMLKTHRVEPEERGQEQEVHADRY 138
P + H + H +P+ +GQ Q + D+Y
Sbjct: 6947 PNQAAHDSRRHEQQPQHQGQPQRIPVDQY 6975
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 52 PRKVHHMLKTHRVEPEERGQEQEVHADRY 138
P + H + H +P+ +GQ Q + D+Y
Sbjct: 6371 PNQAAHDSRRHEQQPQHQGQPQRIPVDQY 6399
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 52 PRKVHHMLKTHRVEPEERGQEQEVHADRY 138
P + H + H +P+ +GQ Q + D+Y
Sbjct: 7011 PNQAAHDSRRHEQQPQHQGQPQRIPVDQY 7039
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,692,257
Number of Sequences: 27780
Number of extensions: 251155
Number of successful extensions: 850
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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