Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30220
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 150 3e-35
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 145 1e-33
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 142 6e-33
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 133 5e-30
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 111 2e-23
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 110 4e-23
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 109 5e-23
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 4e-21
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 95 1e-18
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 81 3e-14
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 72 1e-11
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 68 3e-10
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 65 2e-09
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 63 7e-09
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 60 5e-08
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 58 3e-07
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 53 8e-06
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 45 0.002
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 44 0.005
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 42 0.011
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 39 0.10
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 39 0.14
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 38 0.31
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 37 0.55
UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 33 6.7
UniRef50_Q0PH56 Cluster: TraG-like protein; n=5; Neisseria gonor... 33 8.9
UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 33 8.9
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 150 bits (364), Expect = 3e-35
Identities = 68/81 (83%), Positives = 75/81 (92%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNKQYFKR+QVKFKRRREGKT+YYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
TCQ+AYSRIEGD +CA H
Sbjct: 61 TCQIAYSRIEGDKILCAAYSH 81
Score = 104 bits (250), Expect = 2e-21
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
F AMKGAVDGGLN+PHS KRFPGYDAESK FNAE HRAHIFG HVA+YM +LE +D
Sbjct: 129 FAAMKGAVDGGLNIPHSTKRFPGYDAESKTFNAEAHRAHIFGQHVADYMHALEDED 184
Score = 60.5 bits (140), Expect(2) = 6e-13
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +3
Query: 417 EYNVEPVDNGPGAFRCYLDVGLARTTTGA 503
EYNVE V+NGPGAFRCYLDVGL RTTTGA
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGA 126
Score = 36.3 bits (80), Expect(2) = 6e-13
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 255 VCAAYSHELPRYGVK 299
+CAAYSHELPRYGVK
Sbjct: 75 LCAAYSHELPRYGVK 89
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 145 bits (351), Expect = 1e-33
Identities = 67/81 (82%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNKQYFKRYQVKF+RRREGKT+YYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
T Q+AY+RIEGD +CA H
Sbjct: 61 TVQIAYARIEGDRVVCAAYSH 81
Score = 109 bits (263), Expect = 5e-23
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++D
Sbjct: 160 FGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEED 215
Score = 106 bits (255), Expect = 5e-22
Identities = 50/83 (60%), Positives = 56/83 (67%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAYSHELP+YG++VGLTNYAAAY TG E+NVEP
Sbjct: 75 VCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEP 134
Query: 435 VDNGPGAFRCYLDVGLARTTTGA 503
VD+GPGAFRC+LDVGLARTTTGA
Sbjct: 135 VDDGPGAFRCFLDVGLARTTTGA 157
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 142 bits (345), Expect = 6e-33
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 96.7 bits (230), Expect = 5e-19
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 160 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEED 215
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 133 bits (321), Expect = 5e-30
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MG VKV+KNK YFKRYQVK +RRREGKT+YYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 214 TCQVAYSRIEGDHMCA 261
Q+AYS+IEGD + A
Sbjct: 61 VAQLAYSKIEGDVVVA 76
Score = 77.8 bits (183), Expect = 2e-13
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
F MKG DGG+NVPHS RF G+D ESK++NAE HR I G HVA+YM L+++D
Sbjct: 159 FAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEED 214
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
V +AYSHELPRYG+KVGLTNYAAAY+TG +YNVE
Sbjct: 75 VASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE 134
Query: 435 VDNGPGAFRCYLDVGLARTTTGA 503
+ F+ LD+GLARTTTG+
Sbjct: 135 -EGDRAPFKAVLDIGLARTTTGS 156
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 111 bits (266), Expect = 2e-23
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
M FVK+VK YFKR+Q KF+RRREGKT+YYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 214 TCQVAYSRIEGDHMCA 261
CQV Y+ ++GD + A
Sbjct: 61 ICQVIYATLKGDKVVA 76
Score = 65.7 bits (153), Expect = 1e-09
Identities = 26/58 (44%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAES---KKFNAEVHRAHIFGLHVAEYMRSLEQD 673
F A+KGA DGG+++PH+ +RFPG+ ++ +K++A VH+ IFG+HV +YM L+++
Sbjct: 155 FAALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDRIFGVHVDKYMALLQKE 212
Score = 40.7 bits (91), Expect = 0.034
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTG 338
V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 75 VAAAESTELKRFGLTSGLTNYAAAYATG 102
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 110 bits (264), Expect = 4e-23
Identities = 49/72 (68%), Positives = 58/72 (80%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
M +VKVVKNK YFKRYQVK++RRREGKT+Y ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 214 TCQVAYSRIEGD 249
CQ+A S IEGD
Sbjct: 61 ICQIASSHIEGD 72
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
F A+KGA DGGLN+PH RFPG +FN E R +I G+HVAEYM S++++D
Sbjct: 163 FAALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGIHVAEYMASMKEED 215
Score = 41.5 bits (93), Expect = 0.019
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +3
Query: 264 AYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
A S EL RYG+ VGL NYAAAY+TG E +
Sbjct: 78 AKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKE 137
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+ + +LDVG+ RTTTG
Sbjct: 138 EEGDRKPIKAFLDVGITRTTTG 159
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 109 bits (263), Expect = 5e-23
Identities = 45/74 (60%), Positives = 64/74 (86%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
M FVKVVKNK YFKR+QVK++RRREGKT+Y+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 214 TCQVAYSRIEGDHM 255
Q+ ++I GD +
Sbjct: 84 IAQIVQAKIVGDEV 97
Score = 73.3 bits (172), Expect = 5e-12
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 673
FG +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG HVA+Y++ ++++
Sbjct: 189 FGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFGKHVADYLKQVKEE 243
Score = 55.2 bits (127), Expect = 1e-06
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
V AAY+HELP +G++ GLTNYAAAY+TG V
Sbjct: 98 VMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRT 157
Query: 435 VDNGPG------AFRCYLDVGLARTTTGA 503
+ G F+ LDVGLARTTTGA
Sbjct: 158 KKDDEGDDEERFPFKAILDVGLARTTTGA 186
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 4e-21
Identities = 55/101 (54%), Positives = 67/101 (66%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
+ FVK K + Y KR+QVKFKRRR GKT+Y AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 214 TCQVAYSRIEGDHMCALLIHMSCHVMV*RLV*QIMLQHIQL 336
T Q+ + I GD I M+C M + V QI Q I L
Sbjct: 72 TAQIISASIAGD---MRPIPMNCLTMGLKWVLQITRQLIVL 109
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 95.1 bits (226), Expect = 1e-18
Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +1
Query: 49 VVKNKQYFKRYQVKFKRRREG--KTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 222
V K Y RYQVKF RRR G KT+Y AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 223 VAYSRIEGD-HMCALLIH 273
V Y+ + GD +CA H
Sbjct: 73 VVYATLSGDVTICAAYSH 90
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
+CAAYSHELP+YG+K GLTNYAA Y+TG +Y+VE
Sbjct: 84 ICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQ 143
Query: 435 VDNGPGAFRCYLDVGLARTTTGA 503
D F+C+LD GL RT+TGA
Sbjct: 144 GDEEARPFKCFLDTGLVRTSTGA 166
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/62 (41%), Positives = 41/62 (66%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD*GFF 688
F A+KGAVDGGL++PH+ KRF GYD + K + + +I G VAEY +++++ F
Sbjct: 169 FAALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPDTLERYIKGGVVAEYAEEMQEEEPEKF 228
Query: 689 QE 694
++
Sbjct: 229 EQ 230
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 80.6 bits (190), Expect = 3e-14
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +1
Query: 46 KVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 225
K+VKN YF R+Q KF+RRRE KT+Y R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 226 AYSRIEGD 249
+ + GD
Sbjct: 64 VVAELTGD 71
Score = 56.8 bits (131), Expect = 5e-07
Identities = 35/83 (42%), Positives = 43/83 (51%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VC A S ELP+YG+K+GL+NY AAY+TG EY +
Sbjct: 74 VCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKTEITEEYLNDE 130
Query: 435 VDNGPGAFRCYLDVGLARTTTGA 503
+ P F+ LDVGLARTTTGA
Sbjct: 131 ENRRP--FKVILDVGLARTTTGA 151
Score = 38.7 bits (86), Expect = 0.14
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKR----FPGYDAESKKFNAEV--------HRAHIFGLHVAEY 652
F MKGAVDGGL +PH++ R F D ++ K +V ++ +I G VA+Y
Sbjct: 154 FAVMKGAVDGGLFIPHNVCRLACKFDKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADY 213
Query: 653 MRSLEQD 673
MR L+++
Sbjct: 214 MRKLKKE 220
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKK---FNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGA DGGL+VPHS KRFPGY + + ++A+ HR IFG HVA YM L+++D
Sbjct: 109 FGALKGACDGGLHVPHSEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYMEYLKEED 167
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/80 (40%), Positives = 37/80 (46%)
Frame = +3
Query: 261 AAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVD 440
+A S EL YGVKVGLTNYAAAY TG Y+VE +
Sbjct: 26 SADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKLEVDGEVYHVEEEE 85
Query: 441 NGPGAFRCYLDVGLARTTTG 500
N F+ LDVG+ TTG
Sbjct: 86 NERRPFKALLDVGVKNVTTG 105
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 72.1 bits (169), Expect = 1e-11
Identities = 29/60 (48%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Frame = +1
Query: 85 VKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH-MCA 261
++ K+ +G T+YYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D +CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGY-----DAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 673
FG +KGA DGG+N+PHS RFPGY + ES K+ E H+A IFG H+ YM+ L+
Sbjct: 449 FGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQ 508
Query: 674 D*GFFQE 694
FQ+
Sbjct: 509 SNEAFQK 515
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/82 (36%), Positives = 38/82 (46%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
+CAA S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 364 LCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDE 423
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
F+ LD GL RTTTG
Sbjct: 424 DQKEKKPFKAILDAGLVRTTTG 445
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYY 126
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +YM L ++D
Sbjct: 82 FGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYMCFLMEED 137
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTG 338
VCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 25 VCAAYAHELPKSGVKVGLTNYAAAYCIG 52
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +1
Query: 61 KQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 240
+ Y K +QVK +RRREGKT+Y R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 241 EGDHM 255
+GD +
Sbjct: 64 DGDRV 68
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGA D GLNVPHS +F G+ + F+A+ IFG +++EYM+ L D
Sbjct: 153 FGALKGASDAGLNVPHSAAKFYGHKPDG-SFDAKELHDRIFGYNISEYMKQLRDGD 207
Score = 46.4 bits (105), Expect = 7e-04
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 264 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVD 440
A S EL RYG+ G TNY+AAY+TG Y+V + +D
Sbjct: 72 ADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDID 129
Query: 441 NGPGAFRCYLDVGLARTTTGA 503
A R +LD+GLAR+T GA
Sbjct: 130 GEKKAPRVFLDIGLARSTRGA 150
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 62.9 bits (146), Expect = 7e-09
Identities = 26/64 (40%), Positives = 43/64 (67%)
Frame = +1
Query: 58 NKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 237
N Y R+++K +RRR GKT+Y R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 238 IEGD 249
++GD
Sbjct: 69 VDGD 72
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNA-EVHRAHIFGLHVAEYMRSLEQDD 676
F +MKG+VD G+N+PH+ + + ++ + ++ E+ G+H+ +Y+ L+ +D
Sbjct: 146 FASMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHIIKYIDLLKNED 200
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 60.1 bits (139), Expect = 5e-08
Identities = 44/131 (33%), Positives = 60/131 (45%)
Frame = +1
Query: 82 QVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHMCA 261
+++F+R +EGKT+YYARKRL +QDKN+YNTP+ + + C
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPEXDDSSCNXQRYHLPDCIXKKFXSSVPC- 94
Query: 262 LLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDCFKDLDLTPYTLAQQMSQVMNTMLNLST 441
+HM MV +L IMLQ I L C L T A+ +NTM T
Sbjct: 95 --MHMKFQNMVXKLAXNIMLQPIALACCWPAGFXIGLAWTRSMKAKWRXMEVNTMWKALT 152
Query: 442 MDQEHLDVIWM 474
+ IWM
Sbjct: 153 VSLVPSLAIWM 163
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/53 (43%), Positives = 39/53 (73%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 667
FG +K A+DG LN+PH+ +RF G ++K+ +A+VHR I+G +V+ Y+ +L+
Sbjct: 73 FGVLKEALDGSLNIPHNDRRFVGSSKDNKQLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +1
Query: 76 RYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHM 255
RY+V +RRREGKTNYY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 256 CA 261
A
Sbjct: 59 IA 60
Score = 32.7 bits (71), Expect = 8.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPG 577
F A+KGA+D G+ +PHS + PG
Sbjct: 118 FAALKGALDAGVEIPHSEEILPG 140
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +1
Query: 76 RYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 249
RY V F+RR EGKT+YY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLL-----SSGTP--RMVVRKTNRQIIVQLVVPEVEGD 56
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +1
Query: 76 RYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 249
RY+V F+RRREG+TNY+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGD 56
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = +1
Query: 79 YQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 249
Y+V+FKRRREGKTNY R +LV DK R++VR+++ Q+ GD
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGD 56
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 39.1 bits (87), Expect = 0.10
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 76 RYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHM 255
RY+V +RRRE +T+Y+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 256 CA 261
A
Sbjct: 59 LA 60
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 587 ESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
+SK+ +AEVHR +I+G HVA YM L +D+
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDE 33
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 37.5 bits (83), Expect = 0.31
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 207
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 208 DVTCQVAYSRIEGDHMCA 261
+++ + +S + GD + A
Sbjct: 59 NLSGVITFSSLSGDTIVA 76
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 36.7 bits (81), Expect = 0.55
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 73 KRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 252
K +++FKRRR G+T+Y R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 253 M 255
+
Sbjct: 58 V 58
>UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 534
Score = 33.5 bits (73), Expect = 5.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = -3
Query: 369 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK--QRTH--MVTFNPRVGHLA 217
+F A+ DQ +L H++++ H+ A+H ++ Q+ H FNP +GH A
Sbjct: 120 IFSAMNAAQFDQYGLLSHSVANASHQHHAASHQHQHHQQPHHQHAAFNPALGHAA 174
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 33.1 bits (72), Expect = 6.7
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +1
Query: 94 KRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHM 255
KRRREG T+Y R RLV+ + R ++R + K + Q+ EGDH+
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHV 54
>UniRef50_Q0PH56 Cluster: TraG-like protein; n=5; Neisseria
gonorrhoeae|Rep: TraG-like protein - Neisseria
gonorrhoeae
Length = 1138
Score = 32.7 bits (71), Expect = 8.9
Identities = 24/90 (26%), Positives = 40/90 (44%)
Frame = -3
Query: 369 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTHMVTFNPRVGHLACYIFVGETH 190
+F V + + + NMLQ+N + N A K RT + N G++A +F G
Sbjct: 204 LFTNVSQIASRRGNMLQYNGKSKTMTCNEAAKELKDRTRFYSKNYLPGYIADRVFAGLGT 263
Query: 189 NQTIFRCVIFVLVLNNEAFTSIIISFPFTT 100
N V ++ L N +F ++ + F T
Sbjct: 264 NSAGINRVNALVTLGNSSFQYLLDNARFDT 293
>UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1936
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 46 KVVKNKQYFKRYQVKFKRRREG-KTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
+++K + F+ ++ +KR+RE K++Y + V+++ NKYN + I L++KD+
Sbjct: 1107 ELLKKNRSFENHEQIYKRQREKLKSHYKSSMSKVIENSNKYNN-LIKDIEALNSKDI 1162
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
+ F +V+ ++YF RY + + ++ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 214 TCQVA 228
C +A
Sbjct: 161 QCSLA 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,871,018
Number of Sequences: 1657284
Number of extensions: 13642922
Number of successful extensions: 31623
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31594
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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