Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30220
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   145   1e-36
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.3  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.3  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  145 bits (352), Expect = 1e-36
 Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
 Frame = +1

Query: 34  MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
           MGFVKVVKNKQYFKRYQV+F+RRREGKT+YYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 214 TCQVAYSRIEGDH-MCALLIH 273
           TCQ+AY RIEGD  +CA   H
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSH 81



 Score =  107 bits (258), Expect = 3e-25
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = +2

Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
           FGAMKGAVDGGLN+PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YMR+LE++D
Sbjct: 160 FGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEED 215



 Score =  105 bits (252), Expect = 1e-24
 Identities = 52/83 (62%), Positives = 53/83 (63%)
 Frame = +3

Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
           VCAAYSHELPRYGVKVGLTNYAAAY TG                          EY VEP
Sbjct: 75  VCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEP 134

Query: 435 VDNGPGAFRCYLDVGLARTTTGA 503
           VD GP AFRCYLDVGLARTTTG+
Sbjct: 135 VDEGPAAFRCYLDVGLARTTTGS 157


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 73  KRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYR 183
           KR+ V   R   GK+N++   + V+ D+  +  P+ R
Sbjct: 25  KRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 52   VKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLI 189
            VK K++  RY    + +  G +N    ++ +  D N    PK  LI
Sbjct: 2038 VKGKRFRLRYSYDNRGKLIGISNAATDEKFIAIDNNSLGLPKRVLI 2083


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 52   VKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLI 189
            VK K++  RY    + +  G +N    ++ +  D N    PK  LI
Sbjct: 2039 VKGKRFRLRYSYDNRGKLIGISNAATDEKFIAIDNNSLGLPKRVLI 2084


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 376 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 459
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,922
Number of Sequences: 2352
Number of extensions: 16325
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)