Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30220
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 142 8e-34
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 142 8e-34
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 142 8e-34
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 142 8e-34
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 142 8e-34
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 142 8e-34
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 142 8e-34
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 142 1e-33
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 98 3e-20
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 97 7e-20
BC101597-1|AAI01598.1| 406|Homo sapiens kelch domain containing... 31 3.0
BC101595-1|AAI01596.1| 406|Homo sapiens kelch domain containing... 31 3.0
AK098735-1|BAC05398.1| 406|Homo sapiens protein ( Homo sapiens ... 31 3.0
AF111806-1|AAL39008.1| 406|Homo sapiens MSTP025 protein. 31 3.0
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 142 bits (345), Expect = 8e-34
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 160 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEED 215
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 142 bits (345), Expect = 8e-34
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 160 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEED 215
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 142 bits (345), Expect = 8e-34
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 97.1 bits (231), Expect = 5e-20
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 160 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEED 215
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 142 bits (345), Expect = 8e-34
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAA 326
VCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 142 bits (345), Expect = 8e-34
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 160 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEED 215
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 142 bits (345), Expect = 8e-34
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 160 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEED 215
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 142 bits (345), Expect = 8e-34
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 68 ICQIAYARIEGDMIVCAAYAH 88
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 82 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 141
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 142 IDGQPGAFTCYLDAGLARTTTG 163
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 167 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEED 222
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 142 bits (344), Expect = 1e-33
Identities = 63/81 (77%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 MGFVKVVKNKQYFKRYQVKFKRRREGKTNYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 213
MGFVKVVKNK YFKRYQVKF+RRREGKT+YYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 214 TCQVAYSRIEGDH-MCALLIH 273
CQ+AY+RIEGD +CA H
Sbjct: 61 ICQIAYARIEGDMIVCARYAH 81
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 160 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEED 215
Score = 95.9 bits (228), Expect = 1e-19
Identities = 46/82 (56%), Positives = 49/82 (59%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCA Y+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 135 IDGQPGAFTCYLDAGLARTTTG 156
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 97.9 bits (233), Expect = 3e-20
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = +3
Query: 255 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 434
VCAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 25 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 84
Query: 435 VDNGPGAFRCYLDVGLARTTTG 500
+D PGAF CYLD GLARTTTG
Sbjct: 85 IDGQPGAFTCYLDAGLARTTTG 106
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = +1
Query: 184 LIVRLSNKDVTCQVAYSRIEGDH-MCALLIH 273
+IVR++N+D+ CQ+AY+RIEGD +CA H
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAH 31
Score = 35.5 bits (78), Expect = 0.18
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPH 556
FGA+KGAVDGGL++PH
Sbjct: 110 FGALKGAVDGGLSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 96.7 bits (230), Expect = 7e-20
Identities = 41/56 (73%), Positives = 50/56 (89%)
Frame = +2
Query: 509 FGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDD 676
FGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++D
Sbjct: 8 FGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEED 63
>BC101597-1|AAI01598.1| 406|Homo sapiens kelch domain containing 1
protein.
Length = 406
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 291 HNVATHVNKQRTHMVTFNPRVGHLAC 214
HNV T+ KQ TH+ PR+ H AC
Sbjct: 280 HNVTTNCWKQLTHLPKTRPRLWHTAC 305
>BC101595-1|AAI01596.1| 406|Homo sapiens kelch domain containing 1
protein.
Length = 406
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 291 HNVATHVNKQRTHMVTFNPRVGHLAC 214
HNV T+ KQ TH+ PR+ H AC
Sbjct: 280 HNVTTNCWKQLTHLPKTRPRLWHTAC 305
>AK098735-1|BAC05398.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ25869 fis, clone CBR02071. ).
Length = 406
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 291 HNVATHVNKQRTHMVTFNPRVGHLAC 214
HNV T+ KQ TH+ PR+ H AC
Sbjct: 280 HNVTTNCWKQLTHLPKTRPRLWHTAC 305
>AF111806-1|AAL39008.1| 406|Homo sapiens MSTP025 protein.
Length = 406
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 291 HNVATHVNKQRTHMVTFNPRVGHLAC 214
HNV T+ KQ TH+ PR+ H AC
Sbjct: 280 HNVTTNCWKQLTHLPKTRPRLWHTAC 305
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,853,584
Number of Sequences: 237096
Number of extensions: 2244652
Number of successful extensions: 3727
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3719
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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