Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30218
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.79 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   5.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   5.6  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    22   5.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   7.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.7  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 137 LTQAINNWNSNQAWSVPNIFGGVALQPLSQM 229
           L   + N+N    WS+  +FG + LQ LS +
Sbjct: 163 LADNVANFNKIFGWSLIFLFGRIVLQLLSSL 193


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 488 ECRSRHCKPSESNPPTE 538
           EC+S +C+ +   P TE
Sbjct: 28  ECKSNYCQKAPITPDTE 44


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 226 LTEGLQCYSAKNIWNTP 176
           L+EG +CYS   ++N P
Sbjct: 58  LSEGNKCYSKDLLFNLP 74


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 226 LTEGLQCYSAKNIWNTP 176
           L+EG +CYS   ++N P
Sbjct: 58  LSEGNKCYSKDLLFNLP 74


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 226 LTEGLQCYSAKNIWNTP 176
           L+EG +CYS   ++N P
Sbjct: 60  LSEGNKCYSKDLLFNLP 76


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 41  HLQSPNTQTHPSASCKYADSTSSTGVAS 68


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 226 LTEGLQCYSAKNIWNTP 176
           L+EG +CYS   ++N P
Sbjct: 32  LSEGNKCYSKDLLFNLP 48


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 411 NLLQPNRPGAQSTE-KPAEATSTTGVAS 491
           +L  PN     S   K A++TS+TGVAS
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 226 LTEGLQCYSAKNIWNTP 176
           L EG +CYS   ++N P
Sbjct: 60  LNEGNKCYSKDLLFNLP 76


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 430 GLVLSLLRNPLKRPVRP 480
           G++ SLL  PL  P RP
Sbjct: 133 GVLRSLLDRPLPAPERP 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,685
Number of Sequences: 336
Number of extensions: 3545
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)