Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30216
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 162 9e-40
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 161 3e-39
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 161 3e-39
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 161 3e-39
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 161 3e-39
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 161 3e-39
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 161 3e-39
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 161 3e-39
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 161 3e-39
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 160 5e-39
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 153 7e-37
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 119 8e-27
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 36 0.13
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 36 0.13
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 36 0.13
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 36 0.13
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 36 0.13
AL365328-2|CAH73017.1| 340|Homo sapiens protein ( Human DNA seq... 33 0.90
AL359380-3|CAI16270.1| 340|Homo sapiens protein ( end of the TI... 33 0.90
AL139389-3|CAI13927.1| 340|Homo sapiens protein ( r of rudiment... 33 0.90
AK055530-1|BAB70942.1| 458|Homo sapiens protein ( Homo sapiens ... 33 0.90
BC016967-1|AAH16967.2| 545|Homo sapiens RNA pseudouridylate syn... 30 6.4
BC007697-1|AAH07697.1| 554|Homo sapiens RPUSD2 protein protein. 30 6.4
AK055971-1|BAB71059.1| 545|Homo sapiens protein ( Homo sapiens ... 30 6.4
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 162 bits (394), Expect = 9e-40
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +2
Query: 248 EGPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 427
E P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 428 ARILIRQRHICVRKQVVNIPSFIVRLD 508
AR+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLD 91
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 514 KHIDFSLKSPFGGG 555
KHIDFSL+SP+GGG
Sbjct: 94 KHIDFSLRSPYGGG 107
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 161 bits (390), Expect = 3e-39
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 161 bits (390), Expect = 3e-39
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 161 bits (390), Expect = 3e-39
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 161 bits (390), Expect = 3e-39
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 161 bits (390), Expect = 3e-39
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 161 bits (390), Expect = 3e-39
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 161 bits (390), Expect = 3e-39
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 161 bits (390), Expect = 3e-39
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 160 bits (388), Expect = 5e-39
Identities = 77/85 (90%), Positives = 82/85 (96%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRHI VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLD 152
Score = 120 bits (288), Expect = 6e-27
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 58.0 bits (134), Expect = 3e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL+SP G GRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLRSPTGVGRPGRVKRKNAKKGQGG 184
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 153 bits (370), Expect = 7e-37
Identities = 75/85 (88%), Positives = 79/85 (92%)
Frame = +2
Query: 254 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 433
P+RLFEGNALL RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 434 ILIRQRHICVRKQVVNIPSFIVRLD 508
+LIRQRH VRKQVVNIPSFIVRLD
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIVRLD 152
Score = 112 bits (269), Expect = 1e-24
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +3
Query: 75 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 254
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 255 PR 260
PR
Sbjct: 68 PR 69
Score = 61.7 bits (143), Expect = 2e-09
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +1
Query: 514 KHIDFSLKSPFGGGRPGRVKRKNLRKGQGG 603
KHIDFSL SP+GGGRPGRVKRKN +KGQGG
Sbjct: 155 KHIDFSLCSPYGGGRPGRVKRKNAKKGQGG 184
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 119 bits (287), Expect = 8e-27
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = +3
Query: 84 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPR 260
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDPR
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 60
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.13
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +2
Query: 278 ALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 457
ALL +L +G++ + L+ + F RRL T + K +A+ + A + Q H+
Sbjct: 78 ALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHV 136
Query: 458 CVRKQVVNIPSFIVRLDLASTLT 526
V VV P+F+V + +T
Sbjct: 137 RVGPDVVTDPAFLVTRSMEDFVT 159
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.13
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +2
Query: 278 ALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 457
ALL +L +G++ + L+ + F RRL T + K +A+ + A + Q H+
Sbjct: 78 ALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHV 136
Query: 458 CVRKQVVNIPSFIVRLDLASTLT 526
V VV P+F+V + +T
Sbjct: 137 RVGPDVVTDPAFLVTRSMEDFVT 159
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.13
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +2
Query: 278 ALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 457
ALL +L +G++ + L+ + F RRL T + K +A+ + A + Q H+
Sbjct: 78 ALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHV 136
Query: 458 CVRKQVVNIPSFIVRLDLASTLT 526
V VV P+F+V + +T
Sbjct: 137 RVGPDVVTDPAFLVTRSMEDFVT 159
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.13
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +2
Query: 278 ALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 457
ALL +L +G++ + L+ + F RRL T + K +A+ + A + Q H+
Sbjct: 78 ALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHV 136
Query: 458 CVRKQVVNIPSFIVRLDLASTLT 526
V VV P+F+V + +T
Sbjct: 137 RVGPDVVTDPAFLVTRSMEDFVT 159
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 35.9 bits (79), Expect = 0.13
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +2
Query: 278 ALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 457
ALL +L +G++ + L+ + F RRL T + K +A+ + A + Q H+
Sbjct: 78 ALLDKLYALGLVPTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHV 136
Query: 458 CVRKQVVNIPSFIVRLDLASTLT 526
V VV P+F+V + +T
Sbjct: 137 RVGPDVVTDPAFLVTRSMEDFVT 159
>AL365328-2|CAH73017.1| 340|Homo sapiens protein ( Human DNA
sequence from clone RP11-362K18 on chromosome 6 Contains
part of a novel gene. ).
Length = 340
Score = 33.1 bits (72), Expect = 0.90
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 376 SSADAGVQSWPGEVHPSCQN--FDPAKAYLCPQASCEHPIIYCAPGPGKHIDFSL 534
S D V P +HP Q + PAK+ L PQ + APGP H+ FSL
Sbjct: 251 SEQDVTVPPKPVSLHPLYQTKLYPPAKSLLHPQTLSHADCL--APGPFSHLSFSL 303
>AL359380-3|CAI16270.1| 340|Homo sapiens protein ( end of the TINAG
gene for ).).
Length = 340
Score = 33.1 bits (72), Expect = 0.90
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 376 SSADAGVQSWPGEVHPSCQN--FDPAKAYLCPQASCEHPIIYCAPGPGKHIDFSL 534
S D V P +HP Q + PAK+ L PQ + APGP H+ FSL
Sbjct: 251 SEQDVTVPPKPVSLHPLYQTKLYPPAKSLLHPQTLSHADCL--APGPFSHLSFSL 303
>AL139389-3|CAI13927.1| 340|Homo sapiens protein ( r of rudimentary
homolog ).).
Length = 340
Score = 33.1 bits (72), Expect = 0.90
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 376 SSADAGVQSWPGEVHPSCQN--FDPAKAYLCPQASCEHPIIYCAPGPGKHIDFSL 534
S D V P +HP Q + PAK+ L PQ + APGP H+ FSL
Sbjct: 251 SEQDVTVPPKPVSLHPLYQTKLYPPAKSLLHPQTLSHADCL--APGPFSHLSFSL 303
>AK055530-1|BAB70942.1| 458|Homo sapiens protein ( Homo sapiens
cDNA FLJ30968 fis, clone HEART2000411. ).
Length = 458
Score = 33.1 bits (72), Expect = 0.90
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 376 SSADAGVQSWPGEVHPSCQN--FDPAKAYLCPQASCEHPIIYCAPGPGKHIDFSL 534
S D V P +HP Q + PAK+ L PQ + APGP H+ FSL
Sbjct: 369 SEQDVTVPPKPVSLHPLYQTKLYPPAKSLLHPQTLSHADCL--APGPFSHLSFSL 421
>BC016967-1|AAH16967.2| 545|Homo sapiens RNA pseudouridylate
synthase domain containing 2 protein.
Length = 545
Score = 30.3 bits (65), Expect = 6.4
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 370 GASSADAGVQSWPGEVHPSCQNFDPAKAYLCPQASCEHPIIYCAPGPGKH 519
G + DA V+ PG P+ + +PA EHP APGPGKH
Sbjct: 57 GDAGGDAKVELSPGPPKPAGREVEPAPV------GGEHPSA-AAPGPGKH 99
>BC007697-1|AAH07697.1| 554|Homo sapiens RPUSD2 protein protein.
Length = 554
Score = 30.3 bits (65), Expect = 6.4
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 370 GASSADAGVQSWPGEVHPSCQNFDPAKAYLCPQASCEHPIIYCAPGPGKH 519
G + DA V+ PG P+ + +PA EHP APGPGKH
Sbjct: 66 GDAGGDAKVELSPGPPKPAGREVEPAPV------GGEHPSA-AAPGPGKH 108
>AK055971-1|BAB71059.1| 545|Homo sapiens protein ( Homo sapiens
cDNA FLJ31409 fis, clone NT2NE2000174. ).
Length = 545
Score = 30.3 bits (65), Expect = 6.4
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 370 GASSADAGVQSWPGEVHPSCQNFDPAKAYLCPQASCEHPIIYCAPGPGKH 519
G + DA V+ PG P+ + +PA EHP APGPGKH
Sbjct: 57 GDAGGDAKVELSPGPPKPAGREVEPAPV------GGEHPSA-AAPGPGKH 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,533,932
Number of Sequences: 237096
Number of extensions: 2233637
Number of successful extensions: 5872
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5869
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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