Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30214
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.54 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.54 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.54 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.54 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 491 KNDFVVLLGDGTTADYLWALFFRFW 417
           +  F+V L       ++W L F FW
Sbjct: 116 EKQFIVKLPSAERVAWMWCLIFAFW 140


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 491 KNDFVVLLGDGTTADYLWALFFRFW 417
           +  F+V L       ++W L F FW
Sbjct: 116 EKQFIVKLPSAERVAWMWCLIFAFW 140


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 491 KNDFVVLLGDGTTADYLWALFFRFW 417
           +  F+V L       ++W L F FW
Sbjct: 116 EKQFIVKLPSAERVAWMWCLIFAFW 140


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 491 KNDFVVLLGDGTTADYLWALFFRFW 417
           +  F+V L       ++W L F FW
Sbjct: 116 EKQFIVKLPSAERVAWMWCLIFAFW 140


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 228 RDHRRSCWSSDRQRRI 181
           RD  R+ WS+ RQR I
Sbjct: 211 RDFLRTYWSAKRQRDI 226


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 232 DGLGGSIGVDSPPVDSP 282
           DGL GS+ +  PP   P
Sbjct: 253 DGLYGSVVIRQPPAKDP 269


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 232 DGLGGSIGVDSPPVDSP 282
           DGL GS+ +  PP   P
Sbjct: 253 DGLYGSVVIRQPPAKDP 269


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 485 DFVVLLGDGTTADY 444
           D + L GDGT+A++
Sbjct: 191 DSITLFGDGTSANF 204


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 79  IPPRVWPSRVPQRQL 35
           +  R WPSRV  ++L
Sbjct: 277 VSSRAWPSRVANQKL 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,711
Number of Sequences: 336
Number of extensions: 870
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)