Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30213
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 138 1e-31
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 123 3e-27
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 115 1e-24
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 112 8e-24
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 107 2e-22
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 104 2e-21
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 102 7e-21
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 101 1e-20
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 98 1e-19
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 94 3e-18
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 89 1e-16
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 87 3e-16
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 87 5e-16
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 86 6e-16
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 85 1e-15
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 80 5e-14
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 78 2e-13
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 77 4e-13
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 76 9e-13
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 75 1e-12
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 71 2e-11
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 66 5e-10
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 66 9e-10
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 63 5e-09
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 61 2e-08
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 61 3e-08
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 58 2e-07
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 56 6e-07
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 53 5e-06
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 52 9e-06
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 52 1e-05
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 51 2e-05
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 51 3e-05
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 49 1e-04
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 49 1e-04
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.013
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.21
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 38 0.21
UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1; ... 36 0.86
UniRef50_A1CPL5 Cluster: Class V chitinase, putative; n=8; root|... 35 2.0
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 34 2.6
UniRef50_A6DJ25 Cluster: Probable ECF sigma factor; n=2; Lentisp... 33 6.1
UniRef50_Q54DR2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_Q9SJZ9 Cluster: Putative uncharacterized protein At2g22... 33 8.0
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 138 bits (333), Expect = 1e-31
Identities = 77/170 (45%), Positives = 103/170 (60%), Gaps = 4/170 (2%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 224
MSG LDVL + EEDV K LAA THLG N++FQME Y+YKR++DG ++INL+RTWEKL+L
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 225 AARAVVAIENPL---MCSSSHHGPSVSVLY*SLP-RTPVLRLLRGVSHQVLLLTRFKLHS 392
AARA+VAIENP + SS + G + + + TP+ + + F+
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 393 VNLVS*LYWTLHKTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
+ +V+ PL + P IALCNTD P ++VDIAIPCN K
Sbjct: 121 LLVVT----DPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNK 166
Score = 126 bits (303), Expect = 6e-28
Identities = 60/72 (83%), Positives = 63/72 (87%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
PADV VISSR GQRAVLKFAA TGATPI GRFTPG FTNQIQAAFREPRLL+V DP D
Sbjct: 71 PADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRAD 130
Query: 434 HQPITEASYVNI 469
HQP+TEASYVN+
Sbjct: 131 HQPLTEASYVNL 142
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 123 bits (297), Expect = 3e-27
Identities = 69/122 (56%), Positives = 80/122 (65%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
PADV V++++PFGQRA+LKFA +TGA PI GRFTPG FTNQIQ AFREPRLLIV D D
Sbjct: 71 PADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDARSD 130
Query: 434 HQPITEASYVNISCDCFVQHRLPH*ICGHCYPMQHQILPNLLGLIVGGLLAREVFEGFRG 613
HQPITEA+YVNI F P P + + N LGL + LL REV RG
Sbjct: 131 HQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPC-NNMGKNSLGL-MWWLLCREVLR-LRG 187
Query: 614 VL 619
+
Sbjct: 188 TI 189
Score = 118 bits (285), Expect = 9e-26
Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 4/168 (2%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 224
MSGGL+VL++ E+DVTK+LAA THLG NV+ QM YV+K + DG +IN+R+TWEKL+L
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 225 AARAVVAIENPL-MC--SSSHHGPSVSVLY*SLPRT-PVLRLLRGVSHQVLLLTRFKLHS 392
AAR + AIENP +C ++ G + + P+ + + F+
Sbjct: 61 AARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPR 120
Query: 393 VNLVS*LYWTLHKTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCN 536
+ +VS P+ + PVIA CNT+ P +++D+AIPCN
Sbjct: 121 LLIVS----DARSDHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCN 164
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 115 bits (276), Expect = 1e-24
Identities = 68/122 (55%), Positives = 76/122 (62%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P DV ISSR FGQRAVLKFAAHTGATPI GRFTPG+FTN I +F+EPRL+IV DP D
Sbjct: 70 PEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSD 129
Query: 434 HQPITEASYVNISCDCFVQHRLPH*ICGHCYPMQHQILPNLLGLIVGGLLAREVFEGFRG 613
Q I EASYVNI P P ++ + +GLI LLAREV RG
Sbjct: 130 AQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNR-GKHSIGLI-WYLLAREVLR-LRG 186
Query: 614 VL 619
L
Sbjct: 187 AL 188
Score = 97.9 bits (233), Expect = 2e-19
Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Frame = +3
Query: 72 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 251
L ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEKLVLAAR + AI
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 252 NP---LMCSSSHHGPSVSVLY*S-LPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYW 419
NP + SS G + + + TP+ S + FK + +V+
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVT---- 124
Query: 420 TLHKTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
+ + PVIAL + D P++FVD+AIPCN +
Sbjct: 125 DPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNR 165
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 112 bits (269), Expect = 8e-24
Identities = 55/71 (77%), Positives = 59/71 (83%)
Frame = +2
Query: 257 ADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 436
ADV VISSR GQRAVLKFAA TGATPI G FTPG FT+QIQAAFREPRL +V DP DH
Sbjct: 152 ADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPRVDH 211
Query: 437 QPITEASYVNI 469
QP+ EASYVN+
Sbjct: 212 QPLMEASYVNL 222
Score = 56.0 bits (129), Expect = 8e-07
Identities = 58/171 (33%), Positives = 70/171 (40%)
Frame = +3
Query: 30 QISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTW 209
Q + TM G DVL +NEEDV K LAA TH +E + VI+ R T
Sbjct: 106 QETFTMFGAPDVLQMNEEDVLKFLAARTH--SEKLLLAARAIAAIENLADVSVISSRNTG 163
Query: 210 EKLVLAARAVVAIENPLMCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLH 389
++ VL A C + S PR PV+ R V HQ L+ +
Sbjct: 164 QRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR-VDHQPLMEASY--- 219
Query: 390 SVNLVS*LYWTLHKTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
VNL P IALCNTD P +VDIAIPCN K
Sbjct: 220 -VNL-----------------------PTIALCNTDSPLCYVDIAIPCNNK 246
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 107 bits (257), Expect = 2e-22
Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = +3
Query: 66 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 245
++ E D+ MLAA HLG +NV+FQME YV+KRRADG H+INL +TW+KL+LAAR +VA
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 246 IENPLMCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWTL 425
+ENP + P + + L G H T K L T
Sbjct: 91 VENPQDVIAQAARPYGQRAVLKFAQYTGAKALAG-RHTPGTYTNQKDAVFAEPRVLVVTD 149
Query: 426 HKT-INPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
+T P+ + P IA C+TD P K VDIAIP N K
Sbjct: 150 PRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNK 189
Score = 95.5 bits (227), Expect = 1e-18
Identities = 54/124 (43%), Positives = 71/124 (57%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P DV ++RP+GQRAVLKFA +TGA + GR TPG +TNQ A F EPR+L+V DP D
Sbjct: 94 PQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRTD 153
Query: 434 HQPITEASYVNISCDCFVQHRLPH*ICGHCYPMQHQILPNLLGLIVGGLLAREVFEGFRG 613
QPI+E ++VNI F P P ++ ++ L LLAR V + RG
Sbjct: 154 AQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYY--LLARMVLQ-MRG 210
Query: 614 VLPP 625
+ P
Sbjct: 211 TISP 214
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 104 bits (250), Expect = 2e-21
Identities = 49/72 (68%), Positives = 56/72 (77%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
PADV V+S+R +G RAVLKFAAHTGAT I GRFTPG FTN I +REPRL++V DP D
Sbjct: 73 PADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRAD 132
Query: 434 HQPITEASYVNI 469
Q I EAS+VNI
Sbjct: 133 AQAIKEASFVNI 144
Score = 94.7 bits (225), Expect = 2e-18
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Frame = +3
Query: 51 GGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 230
G ++L +ED+ ++LAA H+G++N+ +M+ YV+KRR+DG H++NL +TWEKLVLAA
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 231 RAVVAIENPL-MC--SSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNL 401
R + IENP +C S+ +G + + + + + +TR L
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITR-TYREPRL 123
Query: 402 VS*LYWTLHKTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
+ + + + PVIALC+TD VDIAIP N K
Sbjct: 124 I--VVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNK 168
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 102 bits (245), Expect = 7e-21
Identities = 64/162 (39%), Positives = 88/162 (54%), Gaps = 3/162 (1%)
Frame = +3
Query: 66 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 245
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEKL +AAR +VA
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 246 IENP--LMCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYW 419
IENP ++ S+ +VL + + G H T S + L
Sbjct: 72 IENPQDIIVQSARPYGQRAVL--KFAQYTGANAIAG-RHTPGTFTNQMQTSFSEPRLLIL 128
Query: 420 TLHKTIN-PLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
T +T + P+ + + P+IA C+TD P +FVDI IP N K
Sbjct: 129 TDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNK 170
Score = 101 bits (241), Expect = 2e-20
Identities = 47/77 (61%), Positives = 55/77 (71%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P D+ V S+RP+GQRAVLKFA +TGA I GR TPG FTNQ+Q +F EPRLLI+ DP D
Sbjct: 75 PQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTD 134
Query: 434 HQPITEASYVNISCDCF 484
HQPI E + NI F
Sbjct: 135 HQPIKEGALGNIPIIAF 151
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 101 bits (243), Expect = 1e-20
Identities = 46/72 (63%), Positives = 53/72 (73%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
PADV +I +P QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPRLLIV DP D
Sbjct: 71 PADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGD 130
Query: 434 HQPITEASYVNI 469
HQP+ E S VNI
Sbjct: 131 HQPVREGSAVNI 142
Score = 97.5 bits (232), Expect = 2e-19
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 224
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEKL+L
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 225 AARAVVAIENP 257
AARA+ AIENP
Sbjct: 61 AARAICAIENP 71
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3
Query: 471 PVIALCNTDFPTKFVDIAIPCNTKFFPI 554
PVI CNTD P + VDI IPCN + I
Sbjct: 143 PVIGFCNTDSPLQCVDIGIPCNNDKYSI 170
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 98.3 bits (234), Expect = 1e-19
Identities = 44/68 (64%), Positives = 53/68 (77%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P D+ V S+RP+GQRAVLKFA +TGA I GR TPG FTNQ+Q +F EPRLLI+ DP D
Sbjct: 72 PQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTD 131
Query: 434 HQPITEAS 457
HQPI E++
Sbjct: 132 HQPIKESA 139
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 177 GTHVINLRRTWEKLVLAARAVVAIENP 257
G +INL +TWEKL LAAR +VAIENP
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENP 72
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 93.9 bits (223), Expect = 3e-18
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLD 421
S+ P+DV ++ R RA LKF +TG T + GRFTPG+FTNQIQ F EPRL+IV D
Sbjct: 78 SNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLIIVSD 137
Query: 422 PAQDHQPITEASYVNI 469
P+ DHQ + E+ Y+N+
Sbjct: 138 PSVDHQALRESGYINV 153
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +3
Query: 60 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 239
D+L + ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEKL LAAR +
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 240 VAIEN 254
I N
Sbjct: 75 AGISN 79
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 88.6 bits (210), Expect = 1e-16
Identities = 52/157 (33%), Positives = 75/157 (47%)
Frame = +3
Query: 72 LNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 251
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K+V AAR +V I+
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 252 NPLMCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWTLHK 431
+P + + P + G R + L
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVV 134
Query: 432 TINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
+L+ P I+LCN+D KF+D+AIPCN K
Sbjct: 135 DRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNK 171
Score = 87.4 bits (207), Expect = 3e-16
Identities = 51/115 (44%), Positives = 66/115 (57%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
+PA++ V+++RP QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVV 134
Query: 431 DHQPITEASYVNISCDCFVQHRLPH*ICGHCYPMQHQILPNLLGLIVGGLLAREV 595
D Q I EASYVNI P ++ P +GLI LLAREV
Sbjct: 135 DRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNK-TPMSIGLIY-WLLAREV 187
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 87.4 bits (207), Expect = 3e-16
Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Frame = +3
Query: 84 DVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENP-- 257
DV K++A H G +N + M+ Y++ R +GT++I+L TWEKL+LAAR + A+ENP
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQD 93
Query: 258 -LMCSSSHHGPSVSVLY*SLPRTPVL--RLLRGV-SHQVLLLTRFKLHSVNLVS*LYWTL 425
+CS+ G + L L R + G ++Q+ +F V LV+
Sbjct: 94 VTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQI--QKKFMQPRVLLVT----DP 147
Query: 426 HKTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
+ + PVIA C+TD P +FVDIAIPCN +
Sbjct: 148 RTDQQAFREASLVNIPVIAFCDTDAPLEFVDIAIPCNDR 186
Score = 86.2 bits (204), Expect = 6e-16
Identities = 52/123 (42%), Positives = 66/123 (53%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P DV V S+R FGQRA+ KF+ G + + GRF PG FTNQIQ F +PR+L+V DP D
Sbjct: 91 PQDVTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRTD 150
Query: 434 HQPITEASYVNISCDCFVQHRLPH*ICGHCYPMQHQILPNLLGLIVGGLLAREVFEGFRG 613
Q EAS VNI F P P + ++ ++ LLAREV RG
Sbjct: 151 QQAFREASLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSI--SMMYWLLAREVLR-LRG 207
Query: 614 VLP 622
+P
Sbjct: 208 TIP 210
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 86.6 bits (205), Expect = 5e-16
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 8/174 (4%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 224
M+ L +E+ + ML A H+G +NV +M YVY R +G H+INL T EKL +
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 225 AARAVVAIENP---LMCSSSHHGPSVSVLY*S--LPRTPVL-RLLRG-VSHQVLLLTRFK 383
AARA+V + NP ++ S+ +G S +VL S + P+ R + G +++Q+ T+
Sbjct: 61 AARAIVTVSNPEEVVVVSARPYG-SRAVLKFSHYVGSHPIAGRWIPGTLTNQI---TQKF 116
Query: 384 LHSVNLVS*LYWTLHKT-INPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
+ LV+ T +T L + + PVIALC+TD P +VDIAIPCN K
Sbjct: 117 IEPRLLVA----TDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNK 166
Score = 85.8 bits (203), Expect = 8e-16
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P +V V+S+RP+G RAVLKF+ + G+ PI GR+ PG TNQI F EPRLL+ DP D
Sbjct: 71 PEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTD 130
Query: 434 HQPITEASYVNI 469
Q + E+SYV++
Sbjct: 131 AQSLRESSYVSL 142
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 86.2 bits (204), Expect = 6e-16
Identities = 57/125 (45%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
EP DV IS++ FG RAV KFA GA +E RFTPG FTN F EPRL+IV DP
Sbjct: 68 EPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDPNT 127
Query: 431 DHQPITEASYVNISCD--CFVQHRLPH*ICGHCYPMQHQILPNLLGLIVGGLLAREVFEG 604
D Q + EA+Y NI C C L + C P + N +GL++ LL REV
Sbjct: 128 DSQAVHEAAYANIPCIALCDTDAHLDYVDC--VIPCNTK-NKNSMGLVM-WLLTREVLR- 182
Query: 605 FRGVL 619
RG L
Sbjct: 183 LRGAL 187
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +3
Query: 69 ALNEEDVTKM-LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 245
A + E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK+ LAAR + A
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 246 IENP 257
+E P
Sbjct: 66 VEEP 69
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 85.0 bits (201), Expect = 1e-15
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIEG-RFTPGAFTNQIQAA---FREPRLLIVL 418
+P DV V+SSRP GQRAV+KFA +T A+ R+TPG TNQ +A F+EP+LLIV
Sbjct: 95 QPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQLLIVT 154
Query: 419 DPAQDHQPITEASYVNI 469
DP D Q I EASYVNI
Sbjct: 155 DPHLDRQAIVEASYVNI 171
Score = 75.4 bits (177), Expect = 1e-12
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Frame = +3
Query: 60 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAV 239
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+ + LAAR +
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 240 VAIENP--LMCSSSHHGPSVSVL----Y*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNL 401
AIE P +M SS +V+ Y T R G K L
Sbjct: 91 AAIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQL 150
Query: 402 VS*LYWTLHKTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK----FFPIYWV 563
+ + H +++ PVIAL N+D P ++VDI IP + IYW+
Sbjct: 151 L--IVTDPHLDRQAIVEASYVNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIYWL 206
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 79.8 bits (188), Expect = 5e-14
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +2
Query: 248 REPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPA 427
+ P++V VISSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP
Sbjct: 50 KHPSEVGVISSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPR 109
Query: 428 QDHQPITEASYVNI 469
DH + EA YVN+
Sbjct: 110 ADHPFLMEAPYVNL 123
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +3
Query: 96 MLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENP 257
+L A THLG N +F+M +YKR +G ++NL R++EKL+ A +VA+++P
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHP 52
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 77.8 bits (183), Expect = 2e-13
Identities = 44/81 (54%), Positives = 49/81 (60%)
Frame = -3
Query: 256 GFSMXXXXXXXXTSFSQVRRKLITWVPSARRL*T*VSIWKLTFSAPRWVVAASILVTSSS 77
G SM SFSQV +L PSARRL T SIWKLTFS PRWVVA +ILV SSS
Sbjct: 7 GLSMATMARAASCSFSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSS 66
Query: 76 LRASTSNPPDIVALI*VTTKR 14
LR S PPD++ + T R
Sbjct: 67 LRDRISKPPDMLTWKELRTSR 87
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = +2
Query: 287 FGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 466
F Q A+LKFA +TGA I GR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 467 ISCDCF 484
I F
Sbjct: 93 IPTIAF 98
Score = 32.7 bits (71), Expect = 8.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 441 PLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
P+ ++ + P IA C+ D P ++VDI I N K
Sbjct: 84 PIKEVALGNIPTIAFCDIDSPMRYVDIDILTNNK 117
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 75.8 bits (178), Expect = 9e-13
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 2/158 (1%)
Frame = +3
Query: 75 NEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIEN 254
NE D+ K+L H+G M+ YV+K+R+DG ++IN+ +T +K+ LAARA+++IE+
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 255 P--LMCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWTLH 428
P ++ SS++ +++ S + + + ++ T L+ L
Sbjct: 64 PKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISDPLLD 123
Query: 429 KTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
K LL+ PVI++CNTD ++DIAIP N K
Sbjct: 124 K--QALLEASYVNIPVISVCNTDSFLSYIDIAIPGNNK 159
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLD 421
S P + +SS Q A++KF+ I ++ PG TN+ F EPRLLI+ D
Sbjct: 60 SIEHPKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISD 119
Query: 422 PAQDHQPITEASYVNI 469
P D Q + EASYVNI
Sbjct: 120 PLLDKQALLEASYVNI 135
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +2
Query: 248 REPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPA 427
+ P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN +PR+LIV D
Sbjct: 74 KHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTY 133
Query: 428 QDHQPITEASYVNISCDCFV 487
D Q I E+ Y N+ FV
Sbjct: 134 ADKQAILESQYCNLPTIAFV 153
Score = 57.2 bits (132), Expect = 3e-07
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +3
Query: 60 DVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRA-DGTHVINLRRTWEKLVLAARA 236
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEKL++AARA
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 237 VVAIENP---LMCSSSHHGPSVSVLY-*SLPRTPVL-RLLRGVSHQVLLLTRFKLHSVNL 401
I++P + S+ G V + ++ TP+ R + G S + R V +
Sbjct: 70 FCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPG-SFTNSEVKRVYDPRVLI 128
Query: 402 VS*LYWTLHKTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
VS Y +L+ P IA NTD VDIAIP N +
Sbjct: 129 VSDTY----ADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNR 171
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +2
Query: 248 REPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPA 427
+ PA++ V+SSR + AVL FA TGA I RFTPG+ TN + F+E R++IV+DP
Sbjct: 42 KNPAEIPVVSSRQYDYCAVLTFAGQTGAINIADRFTPGSSTNYVTRWFKETRVIIVIDPH 101
Query: 428 QDHQPITEASYVNIS 472
HQ + +A +V+I+
Sbjct: 102 VSHQAMHKALFVDIA 116
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLD 421
S +P D+ V++SRP+ R V KFA G+ + GR PG FTN + + EP++L+V D
Sbjct: 90 SRYDPQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSD 149
Query: 422 PAQDHQPITEASYVNISCDCF 484
P D Q I EA+ V I F
Sbjct: 150 PRTDTQAIKEAAKVGIPIVAF 170
Score = 44.0 bits (99), Expect = 0.003
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE-NPLM 263
V L+A H+G + ME++VY+ RA+G +V+++R+ E+L +AA+ + + ++
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYDPQDII 98
Query: 264 CSSSH---HGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWTLHKT 434
+S + P R V R++ G L T + V LVS T +
Sbjct: 99 VVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIE-PKVLLVSDPR-TDTQA 156
Query: 435 INPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
I K+ + P++A +TD ++D+ IP N K
Sbjct: 157 IKEAAKVGI---PIVAFADTDAKIDYIDLIIPANNK 189
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 66.5 bits (155), Expect = 5e-10
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
EP D+ V++ R + R V KFA TGAT I GRF PG TN ++E +++IV DP
Sbjct: 63 EPQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPLA 122
Query: 431 DHQPITEASYVNI 469
D Q + EA + I
Sbjct: 123 DVQAMKEAVKIGI 135
Score = 42.3 bits (95), Expect = 0.010
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Frame = +3
Query: 114 HLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPLMCSSSHHGPSV 293
H+G + + M+ Y++K R DG +++++++T KL++A + + E + + +
Sbjct: 18 HIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFEPQDILVVAQRQYAF 77
Query: 294 SVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFP 473
+ T + + L K + V + L + + + P
Sbjct: 78 RPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPL-ADVQAMKEAVKIGIP 136
Query: 474 VIALCNTDFPTKFVDIAIPCNTK----FFPIYWV 563
+IALC+ + T FVD+ IP N K IYW+
Sbjct: 137 IIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWL 170
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 65.7 bits (153), Expect = 9e-10
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLD 421
SH +PA + V+SSR +GQ F+ G + GRF PG+ TN F EP ++IV D
Sbjct: 91 SHYDPARILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTD 150
Query: 422 PAQDHQPITEASYVNI 469
PA D Q + EAS + +
Sbjct: 151 PAGDAQVLKEASSIGV 166
Score = 46.0 bits (104), Expect = 8e-04
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE--NPL 260
+ + LAA H+G + M +VY+ R DG +V++++ T E++ +A++ + + L
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHYDPARIL 99
Query: 261 MCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWTLHKTIN 440
+ SS +G + ++ T + L R + LT ++H + T
Sbjct: 100 VVSSRQYGQHPARMFSRALGTRAM-LGRFIPGS---LTNPQIHGFFEPDVIIVTDPAGDA 155
Query: 441 PLLKLHMST-FPVIALCNTDFPTKFVDIAIPCNTK 542
+LK S PV+ALC+T+ T VD+ IP N K
Sbjct: 156 QVLKEASSIGVPVVALCDTNNLTSNVDLVIPTNNK 190
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 63.3 bits (147), Expect = 5e-09
Identities = 42/125 (33%), Positives = 57/125 (45%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
+P+ V+S R +G R V KF G P+ GR PG FTN + F E L++V DP
Sbjct: 71 DPSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRV 130
Query: 431 DHQPITEASYVNISCDCFVQHRLPH*ICGHCYPMQHQILPNLLGLIVGGLLAREVFEGFR 610
D Q + EA + I P P ++ L ++ LLAREV R
Sbjct: 131 DEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRGRKAL--ALIFWLLAREVLR-IR 187
Query: 611 GVLPP 625
G +PP
Sbjct: 188 GDIPP 192
Score = 43.6 bits (98), Expect = 0.004
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Frame = +3
Query: 99 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENP--LMCSS 272
LAA +G + + ME ++Y R DG +++++++T E++ +AA+ + + ++ S
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARYDPSKFVVVSG 80
Query: 273 SHHGPSVSVLY*SLPR-TPVL-RLLRGVSHQVLLLTRFKLHSVNLVS*LYWTLHKTINPL 446
+G + L P+L R+L G L+ F + +V+ +
Sbjct: 81 RQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNP-ALSHFTEADLMMVT----DPRVDEQAV 135
Query: 447 LKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
++ PVIALC+TD P VD+ IP N +
Sbjct: 136 VEAGTMGIPVIALCDTDSPISNVDLIIPTNNR 167
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = +2
Query: 302 VLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 436
VLK TGA PI G FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQM 146
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 45 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGT-HVINL 197
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 251 EPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 430
EP D+ +S R + + +F +TG + GRF PG TN F EP ++ + DP
Sbjct: 64 EPEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRV 123
Query: 431 DHQPITEASYVNI 469
D Q + EA+ + +
Sbjct: 124 DRQALKEATEIGV 136
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +3
Query: 99 LAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE 251
LA+ H+G + ME ++Y+ R+DG +V+++R+T E+L +AA+ + E
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE 64
Score = 33.5 bits (73), Expect = 4.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 471 PVIALCNTDFPTKFVDIAIPCNTK 542
P++ LC+T+ T F+D+ IP N K
Sbjct: 137 PIVGLCDTEHLTSFIDLVIPTNNK 160
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 56.4 bits (130), Expect = 6e-07
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLD 421
S+ EP + SSR +G+ KFA GA GRF PG TN + EP +++V D
Sbjct: 133 SNYEPEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTD 192
Query: 422 PAQDHQPITEASYVNI 469
P D Q + EA V I
Sbjct: 193 PIGDAQAVKEAITVGI 208
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 230
V L A H+G + ME ++++ R DG +V+++ T E++ AA
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAA 129
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 245 HREPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDP 424
H +++ V S + + + KFA G I RF PG TN + EP+LL+V DP
Sbjct: 65 HTGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDP 124
Query: 425 AQDHQPITEASYVNI 469
D Q +TEA+ I
Sbjct: 125 QVDAQAVTEATNAGI 139
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 52.4 bits (120), Expect = 9e-06
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +2
Query: 338 IEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNI 469
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNL 46
Score = 41.1 bits (92), Expect = 0.023
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 438 NPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
N +L+ PVIA+CN+D K+VD AIPCN +
Sbjct: 36 NAILESSYVNLPVIAICNSDNMLKYVDCAIPCNNR 70
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 52.0 bits (119), Expect = 1e-05
Identities = 35/87 (40%), Positives = 46/87 (52%)
Frame = +2
Query: 365 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNISCDCFVQHRLPH*ICGHCYPMQHQI 544
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NI F P P ++
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNK- 88
Query: 545 LPNLLGLIVGGLLAREVFEGFRGVLPP 625
N +G + LLAR V + RG + P
Sbjct: 89 GRNSIGCLF-WLLARMVLQ-MRGTILP 113
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = +2
Query: 254 PADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 433
P+ V V S++P+ + + F G P+ GR PG TN + LL+V DP D
Sbjct: 75 PSRVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTD 134
Query: 434 HQPITEASYVNI 469
Q I EAS I
Sbjct: 135 FQAINEASLTGI 146
Score = 47.6 bits (108), Expect = 3e-04
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVN--FQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIE-NP 257
V + +AA LGA N Q +++ R DG + NL+R E++ +AAR + +
Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYPPSR 77
Query: 258 LMCSSS--HHGPSVSVLY*SLPRTPVL-RLLRGVSHQVLLLTRFKLHSVNLVS*LYWTLH 428
+M S+ + + + + PV RL+ G L + H +++ +
Sbjct: 78 VMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGT-----LTNPYLTHHIDIDLLMVADPK 132
Query: 429 KTINPLLKLHMSTFPVIALCNTDFPTKFVDIAIPCNTK 542
+ + ++ PVIAL +TD F+D+ IPCN K
Sbjct: 133 TDFQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNK 170
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 269 VISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQ 382
V SSR GQ+AVL FAA G+ P GRFTPG T+Q+Q
Sbjct: 48 VTSSRTTGQQAVLSFAAAVGSAPTSGRFTPGTLTDQVQ 85
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 114 HLGAENVNFQMETYVYKRRADGTHVIN 194
HL N + Q++ YVYK++ DG +VIN
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN 27
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +2
Query: 323 TGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 460
TGA P G F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 104 TGAIPTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 159 YKRRADGTHVINLRRTWEK-LVLAARAVVAIEN 254
Y ++DGT++ L RTWEK L+L A+ VA EN
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANEN 89
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 48.8 bits (111), Expect = 1e-04
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Frame = +2
Query: 242 SHREPADVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLD 421
S+ EP ++ V+ R + KF+ T GR+ PG TN + EP ++++ D
Sbjct: 58 SYYEPNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITD 117
Query: 422 PAQDHQPITEA--SYVNISCDCFVQHRLPH*ICGHCYPMQHQILPNLLGLIVGGLLAREV 595
P D + +A S + I C H + C P ++ +L ++ +LARE
Sbjct: 118 PIMDKNALHDAYESGITILALCDTNHTKNY--IDFCIPANNRGSKSL--ALIYWILAREY 173
Query: 596 FEGFRGVL 619
RGV+
Sbjct: 174 LRN-RGVI 180
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.9 bits (94), Expect = 0.013
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +2
Query: 302 VLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNISCDC 481
+LKFAA TGATPI G FTPG F + + L L P +++ V
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLT-TSLSQRHLVLTHLPL 59
Query: 482 FVQHRLPH*ICGHCYPMQHQ 541
++ GHC+ MQ Q
Sbjct: 60 LYATQILLCAIGHCHHMQQQ 79
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 37.9 bits (84), Expect = 0.21
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +2
Query: 284 PFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 439
P + AV F T A+PI G F NQ QAA EPRLL+V P DHQ
Sbjct: 7 PVSRAAVCCF---TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 87 VTKMLAATTHLGAENVNFQ--METYVYKRRADGTHVINLRRTWEKLVLAARAVVAI 248
+ K++AA HLG +F+ M+ ++Y D H+I+L +T EKL LA + + +
Sbjct: 238 IAKLMAAGCHLGHSTSSFRPSMQPFIYGIY-DKVHIIDLNKTLEKLTLACKVIEGV 292
>UniRef50_O27614 Cluster: Putative uncharacterized protein; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Putative uncharacterized protein - Methanobacterium
thermoautotrophicum
Length = 334
Score = 35.9 bits (79), Expect = 0.86
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = -1
Query: 435 WSCAGSNTIKRRGSRNAA*IWLVKAPGVKRPSIGVAPVCAANFSTAR*PKGRDEMTNTSA 256
WS GS ++R G ++ + + + G PVCA N + +R P R M + +
Sbjct: 119 WSAGGSVEVRRDGPGIEVILYSAEGDEIVSAASGFCPVCAVNIAASRVPSIRRRMASRKS 178
Query: 255 GSRWLRQHEQ 226
+ + ++E+
Sbjct: 179 RNTGMEKYER 188
>UniRef50_A1CPL5 Cluster: Class V chitinase, putative; n=8;
root|Rep: Class V chitinase, putative - Aspergillus
clavatus
Length = 1096
Score = 34.7 bits (76), Expect = 2.0
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Frame = -1
Query: 561 PNRLGRIWCCMG*QCPQI*W--GSLCCTKQSQEMLTYEASVMG*WSCAGSNTIKRRG--- 397
P R++CC P W G+ C + + E V WS G +
Sbjct: 524 PKGQSRLYCCPPDNMPTCTWRGGAPFCNGKCHDG---EVEVSSSWSGTGQSCWTGHKVLC 580
Query: 396 -SRNAA*IWLVKAPGVKRPSIGVAPVCAANFSTAR*PKGRDEMTNTSAGS 250
+NAA A K G AP C+A F+TA P GR +T +S G+
Sbjct: 581 CQQNAA-----NAAAAKCKWYGSAPFCSAPFNTASCPSGRQRLTYSSFGA 625
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 269 VISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 448
+I ++ ++A+ + I + PG F+N+ +F P IV +P D + I
Sbjct: 68 IIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRIIR 127
Query: 449 EASYVNI 469
E S +NI
Sbjct: 128 ELSNINI 134
>UniRef50_A6DJ25 Cluster: Probable ECF sigma factor; n=2;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 196
Score = 33.1 bits (72), Expect = 6.1
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 266 THQRVLDGYDSTSSQNKFFPGTT--QVDHMGTISTSFVD 156
TH V+D + +SQNK G Q+DH+ TIST ++
Sbjct: 81 THSSVVDFFRKQNSQNKRIEGAAKEQIDHINTISTPEIE 119
>UniRef50_Q54DR2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 827
Score = 33.1 bits (72), Expect = 6.1
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = -1
Query: 660 NSTNNIPKPMVHGGSTPRKPSNTSRANKPPTIKPNRLGRI 541
NST++IP+P+ ++P+ S++S ++ P N++G+I
Sbjct: 154 NSTSSIPQPLNSTPTSPQTNSSSSSSSSSPPSSSNKIGKI 193
>UniRef50_Q9SJZ9 Cluster: Putative uncharacterized protein
At2g22340; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At2g22340 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 358
Score = 32.7 bits (71), Expect = 8.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 116 SWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC 235
SW LP+GD +Q C WY + S +G+ + C
Sbjct: 188 SWTEASLLPEGDCFIQLNCLWYKPKEDTSVMGRKMASSDC 227
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,901,188
Number of Sequences: 1657284
Number of extensions: 17348082
Number of successful extensions: 45723
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 43567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45673
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -