Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30213
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   3.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.5  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   8.5  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   8.5  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +3

Query: 21  VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTH--VIN 194
           +VT+++  +  G+D+LA  +EDV + L        E       T +++RR DGT    + 
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255

Query: 195 LRRTWEKLVLAARAVV 242
           L R    L+L  R VV
Sbjct: 256 LPRRDTDLLLDKRIVV 271


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 21/87 (24%), Positives = 33/87 (37%)
 Frame = +2

Query: 260  DVFVISSRPFGQRAVLKFAAHTGATPIEGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 439
            D   IS    GQ +  K          E + TPG   +++  A   PR L  L   +  +
Sbjct: 769  DPMNISDDYDGQDSDTKIPVAEDDEGYEEQDTPGETFDELPTASARPRRLSELSVKKSKK 828

Query: 440  PITEASYVNISCDCFVQHRLPH*ICGH 520
            PI +++ + I           H +C H
Sbjct: 829  PIPKSNALLIFSPTNRFRIFCHWLCNH 855


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +1

Query: 250 RTR*CVRHLITALRSACCTEVCRAHRC-YAY*GA 348
           RT  C+   +       CT+V +A +C Y Y GA
Sbjct: 119 RTEACLAENLYTCDDDLCTQVYKAFQCYYQYYGA 152


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +1

Query: 250 RTR*CVRHLITALRSACCTEVCRAHRC-YAY*GA 348
           RT  C+   +       CT+V +A +C Y Y GA
Sbjct: 119 RTEACLAENLYTCDDDLCTQVYKAFQCYYQYYGA 152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,360
Number of Sequences: 2352
Number of extensions: 19470
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)