Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30208
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.81 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.5  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   7.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   7.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 529 SVSPLTTGKKSKLEFAI-YPAPQVSTAVVEPLQTLSSPTPTQT 654
           S++ +TT  K      +  P P + + ++ P   ++SP+ T T
Sbjct: 389 SLAAMTTHMKEAKHCGVNVPVPPMQSQIINPQPQITSPSNTNT 431


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 445 QRACGFCPKPNLRFPFQWCSDHGHSCW 365
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 370 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 459
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 668 TVLSWSTNESH 700
           T L+W TNES+
Sbjct: 145 TTLNWGTNESY 155


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 592 QVSTAVVEPLQTLSSP 639
           Q ++AVV+PL + S P
Sbjct: 104 QAASAVVDPLNSCSQP 119


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 592 QVSTAVVEPLQTLSSP 639
           Q ++AVV+PL + S P
Sbjct: 163 QAASAVVDPLNSCSQP 178


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 592 QVSTAVVEPLQTLSSP 639
           Q ++AVV+PL + S P
Sbjct: 104 QAASAVVDPLNSCSQP 119


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 592 QVSTAVVEPLQTLSSP 639
           Q ++AVV+PL + S P
Sbjct: 163 QAASAVVDPLNSCSQP 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,382
Number of Sequences: 336
Number of extensions: 3828
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)