Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30208
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 188 3e-48
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 187 7e-48
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 187 9e-48
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 157 6e-39
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 106 2e-23
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 106 2e-23
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 104 6e-23
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 103 2e-22
03_01_0034 + 318432-318825,318902-319851 103 2e-22
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 103 2e-22
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 87 1e-17
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 81 9e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 64 8e-11
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 1.2
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.6
08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617 29 2.8
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.8
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 3.7
08_01_0312 + 2764744-2767390,2767632-2767990 29 3.7
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 29 4.8
12_02_0399 - 18600444-18600591,18600626-18601656 28 6.4
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 6.4
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 6.4
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 6.4
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 28 8.5
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 188 bits (459), Expect = 3e-48
Identities = 97/167 (58%), Positives = 116/167 (69%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKEIVDL LDR+RKLAD CTGLQGFL+F+ + GKKSKL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F IYP+PQVSTAVVEP ++ S LEH+D A ++D + YDI
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLS--THSLLEHTDVAVLLDN-EAIYDI 212
Score = 122 bits (294), Expect = 3e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 187 bits (456), Expect = 7e-48
Identities = 98/167 (58%), Positives = 115/167 (68%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEIVDL LDRIRKLAD CTGLQGFL+F+ + GKKSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F +YP+PQVST+VVEP ++ S LEH+D A ++D + YDI
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLS--THSLLEHTDVAVLLDN-EAIYDI 212
Score = 140 bits (338), Expect = 1e-33
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 187 bits (455), Expect = 9e-48
Identities = 98/167 (58%), Positives = 114/167 (68%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEIVDL LDRIRKLAD CTGLQGFL+F+ + GKKSKL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F +YP+PQVST+VVEP ++ S LEH+D A ++D + YDI
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLS--THSLLEHTDVAVLLDN-EAIYDI 212
Score = 136 bits (330), Expect = 1e-32
Identities = 54/63 (85%), Positives = 62/63 (98%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 157 bits (382), Expect = 6e-39
Identities = 91/191 (47%), Positives = 114/191 (59%), Gaps = 21/191 (10%)
Frame = +1
Query: 202 RRFFQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 381
R F F S + RA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+AR
Sbjct: 106 RDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFAR 165
Query: 382 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKS 561
GHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ + G+KS
Sbjct: 166 GHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKS 225
Query: 562 KLEFAIYPAPQ---------------------VSTAVVEPLQTLSSPTPTQTLEHSDCAF 678
KL F IYP+PQ +STAVVEP ++ S +EH+D
Sbjct: 226 KLGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLS--THSLIEHTDVVV 283
Query: 679 MVDK*KPSYDI 711
++D + YDI
Sbjct: 284 LLDN-EAIYDI 293
Score = 81.4 bits (192), Expect = 6e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 184
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 179 TDKTIGGGDDSFNTFFSETGAGKHVP 256
+D T G D+FNTFFSET +GKHVP
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVP 123
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 106 bits (254), Expect = 2e-23
Identities = 59/152 (38%), Positives = 84/152 (55%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 242 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 301
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + L F+++P+P+VS VVE
Sbjct: 302 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 361
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D ++D + YDI
Sbjct: 362 PYNATLS--VHQLVENADECMVLDN-EALYDI 390
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +2
Query: 50 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 229
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 230 ETGAGKHVP 256
E G+ VP
Sbjct: 233 EASCGRFVP 241
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 106 bits (254), Expect = 2e-23
Identities = 59/152 (38%), Positives = 84/152 (55%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D ++D + YDI
Sbjct: 182 PYNATLS--VHQLVENADECMVLDN-EALYDI 210
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 238
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 239 AGKHVP 256
G+ VP
Sbjct: 56 CGRFVP 61
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 104 bits (250), Expect = 6e-23
Identities = 58/152 (38%), Positives = 84/152 (55%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D ++D + YDI
Sbjct: 182 PYNATLS--VHQLVENADECMVLDN-EALYDI 210
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 103 bits (246), Expect = 2e-22
Identities = 57/152 (37%), Positives = 84/152 (55%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D ++D + YDI
Sbjct: 182 PYNATLS--VHQLVENADECMVLDN-EALYDI 210
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 103 bits (246), Expect = 2e-22
Identities = 57/152 (37%), Positives = 83/152 (54%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D ++D + YDI
Sbjct: 182 PYNATLS--VHQLVENADECMVLDN-EALYDI 210
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 248 HVP 256
VP
Sbjct: 59 FVP 61
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 103 bits (246), Expect = 2e-22
Identities = 57/152 (37%), Positives = 84/152 (55%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + L F+++P+P+VS VVE
Sbjct: 122 KEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D ++D + YDI
Sbjct: 182 PYNATLS--VHQLVENADECMVLDN-EALYDI 210
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 248 HVP 256
VP
Sbjct: 59 FVP 61
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 87.4 bits (207), Expect = 1e-17
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 436 KLADQCTGLQG 468
K A+ C LQG
Sbjct: 122 KEAENCDCLQG 132
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
Query: 248 HVP 256
VP
Sbjct: 59 FVP 61
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 81.0 bits (191), Expect = 9e-16
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 121
Query: 436 KLADQCTGLQ----------------GFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKL 567
K A+ C LQ GF + H S + L
Sbjct: 122 KEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 181
Query: 568 EFAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F+++P+P+VS VVEP S Q +E++D ++D + YDI
Sbjct: 182 TFSVFPSPKVSDTVVEPYNATLS--VHQLVENADECMVLDN-EALYDI 226
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGGR 58
Query: 248 HVP 256
HVP
Sbjct: 59 HVP 61
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 64.5 bits (150), Expect = 8e-11
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 429
RA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++D
Sbjct: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDM 121
Query: 430 IRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYP-APQVSTA 606
I + AD L+GF++ H Y KK ++++P + S
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 607 VVEPLQTLSSPTPTQTLEHSDCAFMVD 687
VV+P +L T + ++DC ++D
Sbjct: 182 VVQPYNSLL--TLKRLTLNADCVVVLD 206
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 251 VP 256
+P
Sbjct: 61 IP 62
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 207 SSPPPMVLSVGIWPSGWMPCSR 142
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 204 SPPPMVLSVGIWPSGWMPCSR 142
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617
Length = 988
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 333 WMKQLSVCASADLINNSRFKIDEDSTGTCLPAPVSLKKVLKESSPPPMVLS 181
WM LS D IN +F +++ +PA +SLK L+ES +V+S
Sbjct: 783 WMSSLSELTFLD-INVKQFGVEDMKILQNMPALLSLKLYLEESPQETLVIS 832
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 201 PPPMVLSVGIWPSGWMPCSR 142
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 324 VSSRTTYYW*GRCGQQLCPWSLHHWK 401
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 168 ARCPQTRPSGVETILSTLSSARPE 239
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 529 SVSPLTTGKKSKLEFAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSD 669
S P T A P+ +VS+A P + S+PTP +SD
Sbjct: 6 SSKPPTPASTPSSRLAAAPSSRVSSAAPHPSPSSSAPTPASRTVYSD 52
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 324 VSSRTTYYW*GRCGQQLCPWSLHHWK 401
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 6.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 397 QWCSDHGHSCWPHLP 353
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 111 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 239
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 195 PMVLSVGIWPSGWMPCSR 142
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>02_01_0471 -
3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 208 FFQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 345
F HF+Q + W+ + VD EP + D+ G R HP ++I
Sbjct: 95 FIMHFVQAFKEWEPQYTEQSVDQEP-ISDDTVLGCSRG--HPSEII 137
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,898,242
Number of Sequences: 37544
Number of extensions: 477546
Number of successful extensions: 1646
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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