Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30208
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 222 3e-58
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 222 3e-58
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 222 3e-58
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 220 1e-57
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 2e-57
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 214 7e-56
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 213 9e-56
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 213 1e-55
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 197 8e-51
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 3e-50
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 194 6e-50
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 187 7e-48
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 165 3e-41
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 6e-23
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 100 1e-21
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 100 1e-21
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 100 2e-21
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 97 9e-21
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 94 1e-19
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 93 3e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 73 2e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 46 3e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 34 0.13
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 32 0.53
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 3.7
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 29 3.7
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 6.5
SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4) 28 8.6
SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 28 8.6
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 222 bits (542), Expect = 3e-58
Identities = 115/167 (68%), Positives = 123/167 (73%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKEI+DLVLDRIRKLADQCTGLQGFLIFH + GKKSKLE
Sbjct: 108 TVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 167
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQVSTAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 168 FAIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 211
Score = 142 bits (343), Expect = 3e-34
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 251 VP 256
VP
Sbjct: 61 VP 62
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 222 bits (542), Expect = 3e-58
Identities = 116/167 (69%), Positives = 123/167 (73%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKEIVDLVLDRIRKLADQCTGLQGFLIFH + GKKSKLE
Sbjct: 542 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 601
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQVSTAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 602 FAIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 645
Score = 221 bits (541), Expect = 3e-58
Identities = 115/167 (68%), Positives = 123/167 (73%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKEIVDLVLDRIRKLADQCTGLQGFLIFH + GKKSKLE
Sbjct: 109 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQVSTAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 169 FAIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 212
Score = 144 bits (348), Expect = 8e-35
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
Score = 142 bits (343), Expect = 3e-34
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 251 VP 256
VP
Sbjct: 495 VP 496
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 222 bits (542), Expect = 3e-58
Identities = 116/167 (69%), Positives = 123/167 (73%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEIVDLVLDRIRKLADQCTGLQGFLIFH + GKKSKLE
Sbjct: 173 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 232
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQ+STAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 233 FAIYPAPQISTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 276
Score = 221 bits (539), Expect = 6e-58
Identities = 114/167 (68%), Positives = 123/167 (73%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKE++DLVLDRIRKLADQCTGLQGFLIFH + GKKSKLE
Sbjct: 694 TVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 753
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQVSTAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 754 FAIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 797
Score = 143 bits (346), Expect = 1e-34
Identities = 62/65 (95%), Positives = 63/65 (96%)
Frame = +2
Query: 62 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 241
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 242 GKHVP 256
GKHVP
Sbjct: 123 GKHVP 127
Score = 142 bits (344), Expect = 3e-34
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 248 HVP 256
HVP
Sbjct: 646 HVP 648
Score = 142 bits (343), Expect = 3e-34
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 251 VP 256
VP
Sbjct: 574 VP 575
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 220 bits (537), Expect = 1e-57
Identities = 114/167 (68%), Positives = 122/167 (73%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEI+DLVLDR RKLADQCTGLQGFLIFH + GKKSKLE
Sbjct: 109 TIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLE 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQ+STAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 169 FAIYPAPQISTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 212
Score = 142 bits (345), Expect = 2e-34
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 219 bits (534), Expect = 2e-57
Identities = 112/167 (67%), Positives = 122/167 (73%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKE++DLVLDRIRKLADQCTGLQGFLIFH + GKKSKLE
Sbjct: 913 TVGKEMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 972
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQ+STAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 973 FAIYPAPQISTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 1016
Score = 210 bits (512), Expect = 1e-54
Identities = 105/152 (69%), Positives = 116/152 (76%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE +D+VLDR+R
Sbjct: 435 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLR 494
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
KLAD CTGLQGFLIFH + GKKSKLEFAIYPAP +S+AVVE
Sbjct: 495 KLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAVVE 554
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T TLEHSDCAFMVD + YDI
Sbjct: 555 PYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 583
Score = 141 bits (341), Expect = 6e-34
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 251 VP 256
VP
Sbjct: 866 VP 867
Score = 139 bits (337), Expect = 2e-33
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 251 VP 256
VP
Sbjct: 433 VP 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 214 bits (522), Expect = 7e-56
Identities = 108/167 (64%), Positives = 122/167 (73%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GK+++++VLDR+RKLADQCTGLQGFLIFH + GKKSKLE
Sbjct: 94 TVGKQLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 153
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQ+STAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 154 FAIYPAPQISTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 197
Score = 209 bits (510), Expect = 2e-54
Identities = 106/167 (63%), Positives = 121/167 (72%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GK+ +D VLDRIRKLADQC+GLQGFL+FH + GKKSKLE
Sbjct: 527 TVGKDHIDNVLDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLE 586
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQ+STAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 587 FAIYPAPQISTAVVEPYNSVL--TTHTTLEHSDCAFMVDN-EAIYDI 630
Score = 140 bits (339), Expect = 1e-33
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 251 VP 256
VP
Sbjct: 480 VP 481
Score = 111 bits (268), Expect = 4e-25
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = +2
Query: 113 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 256
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 48
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 213 bits (521), Expect = 9e-56
Identities = 107/152 (70%), Positives = 119/152 (78%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIR
Sbjct: 29 RAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIR 88
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
KLADQCTGLQGFLIFH + GKKSKLEFA+YPAPQ+STAVVE
Sbjct: 89 KLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVE 148
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ S T T TLEHSDCAFMVD + YDI
Sbjct: 149 PYNSILS-THT-TLEHSDCAFMVDN-EAIYDI 177
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 173 MPTDKTIGGGDDSFNTFFSETGAGKHVP 256
MP+DKTIGGGDDSFNTFF+ETGAGKHVP
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVP 28
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 213 bits (520), Expect = 1e-55
Identities = 110/167 (65%), Positives = 120/167 (71%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F S + RAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKE++D VLDR+RKLAD CTGLQGFLIFH + GKKSKLE
Sbjct: 109 TVGKEMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FAIYPAPQ+STAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 169 FAIYPAPQISTAVVEPYNSVL--TTHTTLEHSDCAFMVDN-EAIYDI 212
Score = 142 bits (343), Expect = 3e-34
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 197 bits (480), Expect = 8e-51
Identities = 99/142 (69%), Positives = 108/142 (76%)
Frame = +1
Query: 286 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 465
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 466 GFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVEPLQTLSSPTP 645
GFLIFH + GKKSKLEFAIYPAPQ+STAVVEP ++ T
Sbjct: 71 GFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSIL--TT 128
Query: 646 TQTLEHSDCAFMVDK*KPSYDI 711
TLEHSDCAFMVD + YDI
Sbjct: 129 HTTLEHSDCAFMVDN-EAIYDI 149
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 195 bits (475), Expect = 3e-50
Identities = 95/152 (62%), Positives = 113/152 (74%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE+V++V+D+IR
Sbjct: 975 RAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIR 1034
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K+ DQC+GLQGFLIFH + GKKSKLEFA+YPAP +STAVVE
Sbjct: 1035 KMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVE 1094
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T TLEHSDC FMVD + YD+
Sbjct: 1095 PYNSVL--TTHTTLEHSDCTFMVDN-EAIYDL 1123
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 194 bits (473), Expect = 6e-50
Identities = 98/139 (70%), Positives = 106/139 (76%)
Frame = +1
Query: 295 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 474
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 475 IFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVEPLQTLSSPTPTQT 654
IFH + GKKSKLEFAIYPAPQ+STAVVEP ++ T T
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSIL--TTHTT 119
Query: 655 LEHSDCAFMVDK*KPSYDI 711
LEHSDCAFMVD + YDI
Sbjct: 120 LEHSDCAFMVDN-EAIYDI 137
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 187 bits (456), Expect = 7e-48
Identities = 93/139 (66%), Positives = 104/139 (74%)
Frame = +1
Query: 295 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 474
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 475 IFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVEPLQTLSSPTPTQT 654
IFH + GKKSKLEFA+YPAPQ+STAVVEP ++ T T
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSIL--TTHTT 119
Query: 655 LEHSDCAFMVDK*KPSYDI 711
LEHSDCAFMVD + YDI
Sbjct: 120 LEHSDCAFMVDN-EAIYDI 137
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 165 bits (401), Expect = 3e-41
Identities = 93/167 (55%), Positives = 106/167 (63%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RAVFVDLEPTVV PEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGK+ VD VLDR+RKLADQC+GLQGF IFH + GKKSKLE
Sbjct: 99 TIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLE 158
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
FA+YPAP +++AVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 159 FAVYPAPHIASAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 202
Score = 141 bits (341), Expect = 6e-34
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 140 bits (338), Expect = 1e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 2e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 248 H 250
H
Sbjct: 256 H 256
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/92 (54%), Positives = 58/92 (63%)
Frame = +1
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K ADQCTGLQGFL+FH + GK+SKLEFA+YPAPQ+STAVVE
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T TLEHSDCAFMVD + YDI
Sbjct: 315 PYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 343
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 104 bits (250), Expect = 6e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 295 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 441
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 100 bits (240), Expect = 1e-21
Identities = 58/152 (38%), Positives = 82/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 275 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 334
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + F++ P+P+VS VVE
Sbjct: 335 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 394
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D + +D + YDI
Sbjct: 395 PYNATLS--VHQLVENTDETYCIDN-EALYDI 423
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +2
Query: 53 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 232
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 233 TGAGKHVP 256
GK+VP
Sbjct: 267 ATGGKYVP 274
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 100 bits (239), Expect = 1e-21
Identities = 57/152 (37%), Positives = 82/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + F++ P+P+VS VVE
Sbjct: 122 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D + +D + YDI
Sbjct: 182 PYNATLS--VHQLVENTDETYCIDN-EALYDI 210
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 99.5 bits (237), Expect = 2e-21
Identities = 56/152 (36%), Positives = 82/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 7 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 66
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C +QGF + H + + F++ P+P+VS VVE
Sbjct: 67 KEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVE 126
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D + +D + YDI
Sbjct: 127 PYNATLS--VHQLVENTDETYCIDN-EALYDI 155
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 97.5 bits (232), Expect = 9e-21
Identities = 55/152 (36%), Positives = 82/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +R
Sbjct: 62 RSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C +QGF + H S + F+I P+P+VS VVE
Sbjct: 122 KEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D + +D + YDI
Sbjct: 182 PYNATLS--VHQLVENTDETYCIDN-EALYDI 210
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 93.9 bits (223), Expect = 1e-19
Identities = 52/90 (57%), Positives = 57/90 (63%)
Frame = +1
Query: 442 ADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVEPL 621
ADQCTGLQGFLIFH + GKKSKLEFAIYPAPQ+STAVVEP
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 60
Query: 622 QTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
++ T TLEHSDCAFMVD + YDI
Sbjct: 61 NSIL--TTHTTLEHSDCAFMVDN-EAIYDI 87
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 92.7 bits (220), Expect = 3e-19
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +1
Query: 295 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 441
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 73.3 bits (172), Expect = 2e-13
Identities = 30/71 (42%), Positives = 46/71 (64%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D + D +R
Sbjct: 18 RSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLR 77
Query: 436 KLADQCTGLQG 468
K A+ C +QG
Sbjct: 78 KEAENCDCMQG 88
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +1
Query: 352 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WS 531
+ AANN+A+G YT G E++D +D IRKLA+ C +QGF I H S
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 532 VSPLTTGKKSKLEFAIYPAPQVSTAVVEPLQ-TLSSPTPTQTLEHSDCAFMVD 687
+ F + P+P VS V EP TLS Q ++ +D A +D
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSF---HQLVDVADAAICID 111
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 345
RA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 220 FLQRDRSWQARTRAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARG 384
F R+ RAV +D+E V+ + ++GT+R + Q + K + NN+A G
Sbjct: 55 FFTRENDDILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHG 112
Query: 385 HYTIGKEIVDLVLDRIRKLADQCTGLQGFL 474
G + +D VLD +++ ++C L GFL
Sbjct: 113 FSEHGPKSIDKVLDLVQREVEKCDRLDGFL 142
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 250 RTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 375
+ RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 74 KARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 544 STERRSINKEVNQSRYLHRRSGRSGILADRYTGQRACGFCPKPNLRFPF 398
+T R + + N RY H + +T +R C F P N+ FPF
Sbjct: 412 NTSRYGHDHDTNTLRYGHEHDTNTSRYEHEHTTKRMCSFRPGSNVVFPF 460
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 244
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 245 KHVPV 259
KH PV
Sbjct: 296 KHAPV 300
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 538 PLTTGKKSKLEFAIYPAPQVSTAVVEPLQTLSSPTPTQTLEH 663
P T ++K E P S EPL+T PT T EH
Sbjct: 1122 PTTEPSRTKPEPTTEPPRTTSEPTTEPLRTTPEPTTEPTTEH 1163
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 128 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 232
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 203 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 93
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 273 IDEDSTGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPC 148
ID D T CLP PVS V PP +++ G++ C
Sbjct: 661 IDGDKTTICLPHPVSASSVPPAEYPPGTKMNIS--DGGFVAC 700
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 297 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 407
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4)
Length = 507
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 381 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRWRYRL 506
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 142 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 186
>SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 1380
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 381 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRWRYRL 506
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 763 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 807
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,537,929
Number of Sequences: 59808
Number of extensions: 520307
Number of successful extensions: 2005
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1945
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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