Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30208
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 209 1e-54
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 209 1e-54
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 209 1e-54
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 209 1e-54
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 205 2e-53
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 205 2e-53
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 205 3e-53
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 203 1e-52
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 201 3e-52
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 201 3e-52
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 195 2e-50
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 195 3e-50
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 192 2e-49
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 188 5e-48
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 188 5e-48
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 184 4e-47
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 102 3e-22
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 101 5e-22
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 101 5e-22
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 101 5e-22
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 99 3e-21
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 99 3e-21
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 79 2e-15
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 79 2e-15
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 44 1e-04
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 44 1e-04
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.47
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 29 3.3
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 5.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 5.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 5.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 209 bits (511), Expect = 1e-54
Identities = 106/167 (63%), Positives = 119/167 (71%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F S + RAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEI+DL LDRIR+LAD CTGLQGFL+FH + GKK+KLE
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F+IYPAPQVSTAVVEP ++ T TLEHSDC+FMVD + YDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 212
Score = 130 bits (314), Expect = 1e-30
Identities = 53/63 (84%), Positives = 61/63 (96%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 209 bits (511), Expect = 1e-54
Identities = 106/167 (63%), Positives = 119/167 (71%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F S + RAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEI+DL LDRIR+LAD CTGLQGFL+FH + GKK+KLE
Sbjct: 108 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 167
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F+IYPAPQVSTAVVEP ++ T TLEHSDC+FMVD + YDI
Sbjct: 168 FSIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 211
Score = 128 bits (309), Expect = 4e-30
Identities = 52/62 (83%), Positives = 60/62 (96%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 251 VP 256
VP
Sbjct: 61 VP 62
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 209 bits (511), Expect = 1e-54
Identities = 106/167 (63%), Positives = 119/167 (71%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F S + RAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEI+DL LDRIR+LAD CTGLQGFL+FH + GKK+KLE
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F+IYPAPQVSTAVVEP ++ T TLEHSDC+FMVD + YDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 212
Score = 130 bits (314), Expect = 1e-30
Identities = 53/63 (84%), Positives = 61/63 (96%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 209 bits (511), Expect = 1e-54
Identities = 106/167 (63%), Positives = 119/167 (71%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F S + RAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEI+DL LDRIR+LAD CTGLQGFL+FH + GKK+KLE
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLE 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F+IYPAPQVSTAVVEP ++ T TLEHSDC+FMVD + YDI
Sbjct: 169 FSIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 212
Score = 130 bits (314), Expect = 1e-30
Identities = 53/63 (84%), Positives = 61/63 (96%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 205 bits (501), Expect = 2e-53
Identities = 102/167 (61%), Positives = 120/167 (71%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F S + R++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKE++D VLDRIR+LAD C+GLQGF +FH + GKKSKLE
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F+IYPAPQVSTAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
Score = 108 bits (260), Expect = 3e-24
Identities = 48/63 (76%), Positives = 54/63 (85%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 205 bits (501), Expect = 2e-53
Identities = 102/167 (61%), Positives = 120/167 (71%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F S + R++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
T+GKE++D VLDRIR+LAD C+GLQGF +FH + GKKSKLE
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLE 166
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F+IYPAPQVSTAVVEP ++ T TLEHSDCAFMVD + YDI
Sbjct: 167 FSIYPAPQVSTAVVEPYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
Score = 108 bits (260), Expect = 3e-24
Identities = 48/63 (76%), Positives = 54/63 (85%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 205 bits (500), Expect = 3e-53
Identities = 99/152 (65%), Positives = 116/152 (76%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR
Sbjct: 62 RSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+LAD C+GLQGF +FH + GKKSKLEF+IYPAPQVSTAVVE
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T TLEHSDCAFMVD + YDI
Sbjct: 182 PYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
Score = 107 bits (257), Expect = 8e-24
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 203 bits (495), Expect = 1e-52
Identities = 98/152 (64%), Positives = 115/152 (75%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR
Sbjct: 62 RSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+LAD C+GLQGF +FH + GKKSKLEF+IYPAPQV TAVVE
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T TLEHSDCAFMVD + YDI
Sbjct: 182 PYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
Score = 107 bits (257), Expect = 8e-24
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 201 bits (491), Expect = 3e-52
Identities = 97/152 (63%), Positives = 114/152 (75%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR
Sbjct: 62 RSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+LAD C+GLQGF +FH + GKKSKLEF+IYPAPQVSTAVVE
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T TLEHSDCAFMVD + YDI
Sbjct: 182 PYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
Score = 106 bits (254), Expect = 2e-23
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 201 bits (491), Expect = 3e-52
Identities = 97/152 (63%), Positives = 114/152 (75%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR
Sbjct: 62 RSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+LAD C+GLQGF +FH + GKKSKLEF+IYPAPQVSTAVVE
Sbjct: 122 RLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T TLEHSDCAFMVD + YDI
Sbjct: 182 PYNSIL--TTHTTLEHSDCAFMVDN-EAIYDI 210
Score = 106 bits (254), Expect = 2e-23
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 195 bits (476), Expect = 2e-50
Identities = 95/167 (56%), Positives = 116/167 (69%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
F F + + RA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKEI+D+V+DR+R+L + C GLQGFL+FH + GKKSKLE
Sbjct: 114 TIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLE 173
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
F IYPAPQVST++VEP ++ T TLEHSDC+FMVD + YDI
Sbjct: 174 FCIYPAPQVSTSMVEPYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 217
Score = 112 bits (270), Expect = 2e-25
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +2
Query: 65 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 244
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 245 KHVP 256
KHVP
Sbjct: 65 KHVP 68
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 195 bits (475), Expect = 3e-50
Identities = 93/152 (61%), Positives = 112/152 (73%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRIR
Sbjct: 61 RSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIR 120
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+LA+ C GLQGF +FH GKKSKLEF+IYPAPQ+ST+VVE
Sbjct: 121 RLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVE 180
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T TLEHSDC+FMVD + YDI
Sbjct: 181 PYNSIL--TTHTTLEHSDCSFMVDN-EAIYDI 209
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/63 (69%), Positives = 47/63 (74%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 248 HVP 256
HVP
Sbjct: 58 HVP 60
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 192 bits (468), Expect = 2e-49
Identities = 91/159 (57%), Positives = 115/159 (72%)
Frame = +1
Query: 211 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 390
+ F S + RA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 391 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLE 570
TIGKE++D+V+DR+R+L ++C LQGFLIFH + GKK+KLE
Sbjct: 109 TIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLE 168
Query: 571 FAIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVD 687
F+IYPAPQ+ST++VEP +L T TLEHSDC+F++D
Sbjct: 169 FSIYPAPQISTSMVEPYNSLL--TTHTTLEHSDCSFIMD 205
Score = 112 bits (269), Expect = 3e-25
Identities = 47/63 (74%), Positives = 53/63 (84%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 248 HVP 256
HVP
Sbjct: 61 HVP 63
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 188 bits (457), Expect = 5e-48
Identities = 94/152 (61%), Positives = 112/152 (73%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR++
Sbjct: 70 RCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVK 129
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+LA+ C GLQGF+IFH L GKK KLEFAIYPAPQVST++VE
Sbjct: 130 RLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVE 189
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T T TLEHSDC FMVD + YDI
Sbjct: 190 PYNSILM-THT-TLEHSDCTFMVDN-EAIYDI 218
Score = 99 bits (238), Expect = 2e-21
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 251 VP 256
VP
Sbjct: 68 VP 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 188 bits (457), Expect = 5e-48
Identities = 94/152 (61%), Positives = 112/152 (73%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
R +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR++
Sbjct: 42 RCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVK 101
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+LA+ C GLQGF+IFH L GKK KLEFAIYPAPQVST++VE
Sbjct: 102 RLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVE 161
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P ++ T T TLEHSDC FMVD + YDI
Sbjct: 162 PYNSILM-THT-TLEHSDCTFMVDN-EAIYDI 190
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +2
Query: 134 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 256
++CLEHGIQPDG D T ++ NTFF+ET GKHVP
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 184 bits (449), Expect = 4e-47
Identities = 91/166 (54%), Positives = 113/166 (68%)
Frame = +1
Query: 214 QHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 393
Q F + + RA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 394 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEF 573
IGKE++D+VLDRIRK + C GLQGFL+FH + GKKSKLEF
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEF 172
Query: 574 AIYPAPQVSTAVVEPLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
++YPAPQVST+VVEP ++ T TLE SDC+FMVD + YD+
Sbjct: 173 SVYPAPQVSTSVVEPYNSIL--TTHTTLELSDCSFMVDN-EAIYDL 215
Score = 81.4 bits (192), Expect = 6e-16
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 251 VP 256
VP
Sbjct: 65 VP 66
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 102 bits (244), Expect = 3e-22
Identities = 60/152 (39%), Positives = 82/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + F++ P+P+VS VVE
Sbjct: 122 KEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D F +D + YDI
Sbjct: 182 PYNATLS--VHQLVENTDETFCIDN-EALYDI 210
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 101 bits (242), Expect = 5e-22
Identities = 60/152 (39%), Positives = 82/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + F++ P+P+VS VVE
Sbjct: 122 KEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D + +D + YDI
Sbjct: 182 PYNATLS--VHQLVENTDETYCIDN-EALYDI 210
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 101 bits (242), Expect = 5e-22
Identities = 59/152 (38%), Positives = 81/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 62 RACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + + F++ P+P+VS VVE
Sbjct: 122 KEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D F +D + YDI
Sbjct: 182 PYNATLS--VHQLVENTDETFCIDN-EALYDI 210
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 101 bits (242), Expect = 5e-22
Identities = 60/152 (39%), Positives = 82/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IR
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ C LQGF + H S + F++ P+P+VS VVE
Sbjct: 122 KEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D + +D + YDI
Sbjct: 182 PYNATLS--VHQLVENTDETYCIDN-EALYDI 210
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 99.1 bits (236), Expect = 3e-21
Identities = 59/152 (38%), Positives = 81/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ LQGF + H S + F++ P+P+VS VVE
Sbjct: 122 KEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D F +D + YDI
Sbjct: 182 PYNATLS--VHQLVENTDSTFCIDN-EALYDI 210
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 99.1 bits (236), Expect = 3e-21
Identities = 59/152 (38%), Positives = 81/152 (53%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +R
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
K A+ LQGF + H S + F++ P+P+VS VVE
Sbjct: 122 KEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVE 181
Query: 616 PLQTLSSPTPTQTLEHSDCAFMVDK*KPSYDI 711
P S Q +E++D F +D + YDI
Sbjct: 182 PYNATLS--VHQLVENTDSTFCIDN-EALYDI 210
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 79.4 bits (187), Expect = 2e-15
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR
Sbjct: 62 RAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+ A+ L+GF + H S K+ +I P+ +VS VVE
Sbjct: 122 REAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVE 181
Query: 616 PLQT-LSSPTPTQTLEHSDC 672
P LS P + + C
Sbjct: 182 PYNAILSMPHLMDNCDENFC 201
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 79.4 bits (187), Expect = 2e-15
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Frame = +1
Query: 256 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 435
RA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR
Sbjct: 62 RAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIR 121
Query: 436 KLADQCTGLQGFLIFHXXXXXXXXXXLPY*WSVSPLTTGKKSKLEFAIYPAPQVSTAVVE 615
+ A+ L+GF + H S K+ +I P+ +VS VVE
Sbjct: 122 REAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVE 181
Query: 616 PLQT-LSSPTPTQTLEHSDC 672
P LS P + + C
Sbjct: 182 PYNAILSMPHLMDNCDENFC 201
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 248 HVP 256
+VP
Sbjct: 59 YVP 61
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 RAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLD 426
RAV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 64 RAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMD 122
Query: 427 RIRKLADQCTGLQGFLIFH 483
I + A+ L G L H
Sbjct: 123 IIIREAENTNNLDGILFTH 141
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 80 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 172
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 RAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLD 426
RAV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 64 RAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMD 122
Query: 427 RIRKLADQCTGLQGFLIFH 483
I + A+ L G L H
Sbjct: 123 IIIREAENTNNLDGILFTH 141
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 80 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 172
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 96 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 251
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 357 FLTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGT 250
FL K F K ++VC S LI R+ DED + T
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDEDISKT 267
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 244 QARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
+ T F VV +++TG + PE+ + E A+N+Y + Y + K V ++
Sbjct: 611 KTETAPAFYSHIDRVVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTII 668
Query: 424 DR 429
D+
Sbjct: 669 DK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 244 QARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
+ T F VV +++TG + PE+ + E A+N+Y + Y + K V ++
Sbjct: 825 KTETAPAFYSHIDRVVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTII 882
Query: 424 DR 429
D+
Sbjct: 883 DK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 244 QARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
+ T F VV +++TG + PE+ + E A+N+Y + Y + K V ++
Sbjct: 961 KTETAPAFYSHIDRVVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTII 1018
Query: 424 DR 429
D+
Sbjct: 1019 DK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 244 QARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
+ T F VV +++TG + PE+ + E A+N+Y + Y + K V ++
Sbjct: 1010 KTETAPAFYSHIDRVVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTII 1067
Query: 424 DR 429
D+
Sbjct: 1068 DK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 244 QARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
+ T F VV +++TG + PE+ + E A+N+Y + Y + K V ++
Sbjct: 1010 KTETAPAFYSHIDRVVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTII 1067
Query: 424 DR 429
D+
Sbjct: 1068 DK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 244 QARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
+ T F VV +++TG + PE+ + E A+N+Y + Y + K V ++
Sbjct: 1002 KTETAPAFYSHIDRVVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTII 1059
Query: 424 DR 429
D+
Sbjct: 1060 DK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 244 QARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
+ T F VV +++TG + PE+ + E A+N+Y + Y + K V ++
Sbjct: 1013 KTETAPAFYSHIDRVVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTII 1070
Query: 424 DR 429
D+
Sbjct: 1071 DK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 244 QARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 423
+ T F VV +++TG + PE+ + E A+N+Y + Y + K V ++
Sbjct: 1014 KTETAPAFYSHIDRVVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTII 1071
Query: 424 DR 429
D+
Sbjct: 1072 DK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,993,908
Number of Sequences: 27780
Number of extensions: 370370
Number of successful extensions: 1108
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -