Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30206
(705 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 25 0.92
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 4.9
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 4.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.9
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 4.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 8.6
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 24.6 bits (51), Expect = 0.92
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +3
Query: 507 PVTVHSKHNDDEQ--YVWESSAGGSFTVRPDSGEPLGRGYKDSSFHGQR 647
P + K D E+ Y W++S F+ + P+ YK + Q+
Sbjct: 411 PAKYYLKSRDPERTPYQWDNSTSAGFSQTNKTWLPVNENYKSLNLAAQK 459
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/34 (23%), Positives = 16/34 (47%)
Frame = -2
Query: 677 CSSHEFCPSPSLTVKGRIFVPSTKGLTAVWADCE 576
C +H+ CP + + + +T T + DC+
Sbjct: 59 CRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCD 92
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/34 (23%), Positives = 16/34 (47%)
Frame = -2
Query: 677 CSSHEFCPSPSLTVKGRIFVPSTKGLTAVWADCE 576
C +H+ CP + + + +T T + DC+
Sbjct: 64 CRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCD 97
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 253 FTLPPDSGEKLSLG 266
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/34 (23%), Positives = 16/34 (47%)
Frame = -2
Query: 677 CSSHEFCPSPSLTVKGRIFVPSTKGLTAVWADCE 576
C +H+ CP + + + +T T + DC+
Sbjct: 64 CRTHDMCPDVMSAGESKHGLTNTASHTRLSCDCD 97
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 216 FTLPPDSGEKLTLG 229
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 216 FTLPPDSGEKLTLG 229
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 216 FTLPPDSGEKLTLG 229
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 216 FTLPPDSGEKLTLG 229
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 216 FTLPPDSGEKLTLG 229
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 216 FTLPPDSGEKLTLG 229
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 284 FTLPPDSGEKLTLG 297
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 576 FTVRPDSGEPLGRG 617
FT+ PDSGE L G
Sbjct: 284 FTLPPDSGEKLTLG 297
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 8.6
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 209 ELISNSSDALDKIRYDLSRIRQNSIVAKSCTSRSFPTRTRALLRSSIPVL 358
+++S L K R L+ + + VAK S P + + SSIP L
Sbjct: 321 QVVSQLEIQLQKERDRLTAMMHHLHVAKQMASPEPPKSSESSTGSSIPKL 370
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,092
Number of Sequences: 438
Number of extensions: 4497
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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