Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30206
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 140 6e-34
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 140 8e-34
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 140 8e-34
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 140 8e-34
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 101 6e-22
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 101 6e-22
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 100 2e-21
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 100 2e-21
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 91 5e-19
At3g51350.1 68416.m05622 aspartyl protease family protein contai... 31 0.56
At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-contain... 29 3.0
At5g63470.1 68418.m07968 CCAAT-box binding transcription factor ... 28 6.9
At1g26170.1 68414.m03194 importin beta-2 subunit family protein ... 28 6.9
At4g32140.1 68417.m04572 expressed protein 27 9.2
At3g25570.1 68416.m03180 adenosylmethionine decarboxylase family... 27 9.2
At2g04620.1 68415.m00470 cation efflux family protein potential ... 27 9.2
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 140 bits (340), Expect = 6e-34
Identities = 77/132 (58%), Positives = 95/132 (71%), Gaps = 5/132 (3%)
Frame = +1
Query: 256 SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 435
SLTD SKLD EL+I+++P+K+ TL+IID+GIGMTKADLVNNLGTIA+SGTK FMEAL
Sbjct: 55 SLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 114
Query: 436 QAGADISMIGQFGVGFYSSYLVADP*LFTLNTMTTSNTCGNLLQEARSQSAQTAV----- 600
QAGAD+SMIGQFGVGFYS+YLVA+ + T T N + E+++ + T
Sbjct: 115 QAGADVSMIGQFGVGFYSAYLVAEKVVVT----TKHNDDEQYVWESQAGGSFTVTRDVDG 170
Query: 601 SPLVEGTKIRPF 636
PL GTKI F
Sbjct: 171 EPLGRGTKITLF 182
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +2
Query: 101 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYD 256
+ Q A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR++
Sbjct: 3 DVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE 54
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 140 bits (339), Expect = 8e-34
Identities = 68/84 (80%), Positives = 74/84 (88%)
Frame = +1
Query: 256 SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 435
SLTD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL
Sbjct: 50 SLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109
Query: 436 QAGADISMIGQFGVGFYSSYLVAD 507
AGAD+SMIGQFGVGFYS+YLVAD
Sbjct: 110 AAGADVSMIGQFGVGFYSAYLVAD 133
Score = 87.8 bits (208), Expect = 6e-18
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +2
Query: 113 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYD 256
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR++
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE 49
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/39 (76%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = +3
Query: 510 VTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGYK 623
V V +KHNDDEQYVWES AGGSFTV R SGE LGRG K
Sbjct: 135 VVVTTKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTK 173
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 140 bits (339), Expect = 8e-34
Identities = 68/84 (80%), Positives = 74/84 (88%)
Frame = +1
Query: 256 SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 435
SLTD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL
Sbjct: 50 SLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109
Query: 436 QAGADISMIGQFGVGFYSSYLVAD 507
AGAD+SMIGQFGVGFYS+YLVAD
Sbjct: 110 AAGADVSMIGQFGVGFYSAYLVAD 133
Score = 87.8 bits (208), Expect = 6e-18
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +2
Query: 113 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYD 256
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR++
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE 49
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/39 (76%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = +3
Query: 510 VTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGYK 623
V V +KHNDDEQYVWES AGGSFTV R SGE LGRG K
Sbjct: 135 VVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTK 173
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 140 bits (339), Expect = 8e-34
Identities = 68/84 (80%), Positives = 74/84 (88%)
Frame = +1
Query: 256 SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 435
SLTD SKLD EL+I IIP+K TLTIID+GIGMTKADLVNNLGTIA+SGTK FMEAL
Sbjct: 50 SLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109
Query: 436 QAGADISMIGQFGVGFYSSYLVAD 507
AGAD+SMIGQFGVGFYS+YLVAD
Sbjct: 110 AAGADVSMIGQFGVGFYSAYLVAD 133
Score = 87.8 bits (208), Expect = 6e-18
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +2
Query: 113 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYD 256
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR++
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE 49
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/39 (76%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = +3
Query: 510 VTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGYK 623
V V +KHNDDEQYVWES AGGSFTV R SGE LGRG K
Sbjct: 135 VVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTK 173
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 101 bits (241), Expect = 6e-22
Identities = 50/88 (56%), Positives = 68/88 (77%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 435
S+T+PS L G +L I+I P+ + GT+TI DTGIGMTK +L++ LGTIA+SGT F++AL
Sbjct: 122 SVTEPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKAL 181
Query: 436 Q----AGADISMIGQFGVGFYSSYLVAD 507
+ GAD +IGQFGVGFYS++LVA+
Sbjct: 182 KENKDLGADNGLIGQFGVGFYSAFLVAE 209
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/54 (51%), Positives = 44/54 (81%)
Frame = +2
Query: 92 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 253
E+ T+ E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+
Sbjct: 67 EKETTEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRF 120
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 101 bits (241), Expect = 6e-22
Identities = 50/88 (56%), Positives = 68/88 (77%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 435
S+T+PS L G +L I+I P+ + GT+TI DTGIGMTK +L++ LGTIA+SGT F++AL
Sbjct: 122 SVTEPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKAL 181
Query: 436 Q----AGADISMIGQFGVGFYSSYLVAD 507
+ GAD +IGQFGVGFYS++LVA+
Sbjct: 182 KENKDLGADNGLIGQFGVGFYSAFLVAE 209
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/54 (51%), Positives = 44/54 (81%)
Frame = +2
Query: 92 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 253
E+ T+ E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+
Sbjct: 67 EKETTEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRF 120
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 99.5 bits (237), Expect = 2e-21
Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 7/132 (5%)
Frame = +1
Query: 256 SLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFME 429
+LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E
Sbjct: 122 ALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVE 181
Query: 430 ALQAGADISMIGQFGVGFYSSYLVADP*LFTLNTMTTSNTCGNLLQEARSQ-----SAQT 594
+Q+ D+++IGQFGVGFYS+YLVAD + ++ N + E+++ S T
Sbjct: 182 KMQSSGDLNLIGQFGVGFYSAYLVAD----YIEVISKHNDDSQYVWESKANGKFAVSEDT 237
Query: 595 AVSPLVEGTKIR 630
PL GT+IR
Sbjct: 238 WNEPLGRGTEIR 249
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +2
Query: 101 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 253
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+
Sbjct: 70 KTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRF 120
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 99.5 bits (237), Expect = 2e-21
Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 7/132 (5%)
Frame = +1
Query: 256 SLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFME 429
+LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E
Sbjct: 122 ALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVE 181
Query: 430 ALQAGADISMIGQFGVGFYSSYLVADP*LFTLNTMTTSNTCGNLLQEARSQ-----SAQT 594
+Q+ D+++IGQFGVGFYS+YLVAD + ++ N + E+++ S T
Sbjct: 182 KMQSSGDLNLIGQFGVGFYSAYLVAD----YIEVISKHNDDSQYVWESKANGKFAVSEDT 237
Query: 595 AVSPLVEGTKIR 630
PL GT+IR
Sbjct: 238 WNEPLGRGTEIR 249
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +2
Query: 101 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 253
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+
Sbjct: 70 KTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRF 120
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 91.5 bits (217), Expect = 5e-19
Identities = 46/88 (52%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 435
S+T+P +L I+I +K G +T+ D+GIGMT+ +LV+ LGTIA+SGT FM+AL
Sbjct: 140 SVTNPELSKDAPDLDIRIYADKENGIITLTDSGIGMTRQELVDCLGTIAQSGTAKFMKAL 199
Query: 436 Q----AGADISMIGQFGVGFYSSYLVAD 507
+ AG D ++IGQFGVGFYS++LVAD
Sbjct: 200 KDSKDAGGDNNLIGQFGVGFYSAFLVAD 227
Score = 74.5 bits (175), Expect = 6e-14
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +2
Query: 110 PAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 253
P E F +QAE+++LM LI+N+ YSNKE+FLRELISN+SDALDK+RY
Sbjct: 91 PPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRY 138
>At3g51350.1 68416.m05622 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 528
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = -1
Query: 333 SALVLVGNDLDVQLFATIE----F*RIRERSYLILSKASDELEISSRRKI 196
S + + G+ +D++LFA + F +RE +Y +L+K+ DEL RR +
Sbjct: 310 SGVSVAGDPVDIRLFAKFDTGSSFTHLREPAYGVLTKSFDELVEDRRRPV 359
>At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-containing
protein similar to SP|Q06881 Biotin carboxyl carrier
protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.};
contains Pfam profile PF00364: Biotin-requiring enzyme
Length = 274
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 110 PAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYDLSRIRQNSIVA 289
PAE E A + + S ++NT K + LIS +D+ ++L VA
Sbjct: 63 PAETEAIADVKDSDETKSTVVNTHLMPKSSEVEALISEITDSSSIAEFELKLGGFRLYVA 122
Query: 290 KSCTSRSFP 316
+ T S P
Sbjct: 123 RKLTDESSP 131
>At5g63470.1 68418.m07968 CCAAT-box binding transcription factor
Hap5a, putative
Length = 250
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 543 QYVWESSAGGSFTVRPDSGEPLGRGYKDS 629
Q VW++SAGG V SG G G DS
Sbjct: 220 QSVWQNSAGGGDDVSYGSGGSSGHGNLDS 248
>At1g26170.1 68414.m03194 importin beta-2 subunit family protein
similar to Importin9 isoform 1 [Mus musculus]
GI:15186756; contains Pfam profile PF03810:
Importin-beta N-terminal domain
Length = 931
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 137 QAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYD 256
++E+ + S + +TF S+ +++LR I + D+ D RYD
Sbjct: 259 ESELMGMFSPLWHTFESSLQVYLRSSIDGAEDSYDG-RYD 297
>At4g32140.1 68417.m04572 expressed protein
Length = 394
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 238 RQNQV*SLTDPSKLDSGKELYIKIIPNKNEGTLTIIDT 351
+ N++ +LTD S ++ G L KII +GT+T D+
Sbjct: 70 KSNKIPALTDDSSVELGSPLRHKIIEMGLQGTITKKDS 107
>At3g25570.1 68416.m03180 adenosylmethionine decarboxylase family
protein contains Pfam profile: PF01536
adenosylmethionine decarboxylase
Length = 349
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +1
Query: 373 DLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADP*LFTLNTMTTSNTC 552
D ++ G +S TK+ ++ + A+ +++ F SY++++ LF TC
Sbjct: 24 DFLDPQGKSLRSLTKSQLDEILTPAECTIVSSLTNSFVDSYVLSESSLFVYPYKIIIKTC 83
Query: 553 G 555
G
Sbjct: 84 G 84
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 300 HQDHSQQERGHSYD--HRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 461
H++H Q H ++ H + + + + NH H + C H HD
Sbjct: 579 HEEHHQHSDSHKHEEHHEHDHHHHSHSHKHEECNHNHDHEHQSHSHNHEECNHNHD 634
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,383,835
Number of Sequences: 28952
Number of extensions: 375202
Number of successful extensions: 1032
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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