Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30203
(707 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 141 1e-34
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 139 3e-34
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 122 7e-29
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 96 4e-21
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 88 1e-18
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 30 0.37
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 30 0.37
SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.65
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.65
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 29 0.86
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 29 0.86
SPBC336.14c |ppk26||serine/threonine protein kinase Ppk26|Schizo... 27 2.0
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.6
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 3.5
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 27 3.5
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 3.5
SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 4.6
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 26 4.6
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 4.6
SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subun... 26 6.1
SPBC12D12.02c |cdm1||DNA polymerase delta subunit Cdm1|Schizosac... 26 6.1
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 26 6.1
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 26 6.1
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 26 6.1
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 25 8.0
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 25 8.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 141 bits (341), Expect = 1e-34
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +3
Query: 6 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIYANGILIVSAIEKSTNKENKITITNDKGR 185
TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+ ANGIL VSA+EK T K KITITNDKGR
Sbjct: 448 TKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGR 507
Query: 186 LSKEEIERMVNEAEKYRNEDDKQRRPSRPRMHL 284
LSKEEI+RMV+EAEKY+ ED+ + + + HL
Sbjct: 508 LSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHL 540
Score = 91.1 bits (216), Expect = 1e-19
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2
Query: 263 IQAKNAFESYCFSMKSTMEDEKLKEKISDSDKQTILDKCKTTIKWLDSNQLADKEEYEHK 442
IQAKN ESY +S++++++D LK+K+ SDK+ I K TI+WLD N A K+EYE K
Sbjct: 534 IQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDK 593
Query: 443 QKELEGIYNPIITQMHXLSLSVPVVCSGFPG 535
QKELEG+ NPI+ +++ + G PG
Sbjct: 594 QKELEGVANPIMAKIYQAGGAPGGAPGGMPG 624
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 139 bits (337), Expect = 3e-34
Identities = 68/93 (73%), Positives = 77/93 (82%)
Frame = +3
Query: 6 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIYANGILIVSAIEKSTNKENKITITNDKGR 185
TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+ ANGIL VSA+EK T K KITITNDKGR
Sbjct: 448 TKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGR 507
Query: 186 LSKEEIERMVNEAEKYRNEDDKQRRPSRPRMHL 284
LSKEEI+RMV EAEKY+ ED+ + + + HL
Sbjct: 508 LSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHL 540
Score = 88.6 bits (210), Expect = 8e-19
Identities = 38/76 (50%), Positives = 57/76 (75%)
Frame = +2
Query: 263 IQAKNAFESYCFSMKSTMEDEKLKEKISDSDKQTILDKCKTTIKWLDSNQLADKEEYEHK 442
IQAKN ESY +S++++++D LK+K+ SDK+T+ K TI+WLDSN A K+E+E K
Sbjct: 534 IQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAK 593
Query: 443 QKELEGIYNPIITQMH 490
QKELE + NPI+ +++
Sbjct: 594 QKELESVANPIMAKIY 609
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 122 bits (293), Expect = 7e-29
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIYANGILIVSAIEKS-TNKENKITITNDK 179
+TKDNNLLGKF+L GIPPAPRGVPQIEVTF++ ANG+L VSA++KS K K+ I NDK
Sbjct: 476 LTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDK 535
Query: 180 GRLSKEEIERMVNEAEKYRNED 245
GRLS+E+IERMV EAE++ ED
Sbjct: 536 GRLSEEDIERMVKEAEEFAEED 557
Score = 62.9 bits (146), Expect = 4e-11
Identities = 28/81 (34%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +2
Query: 254 KETIQAKNAFESYCFSMKSTMED-EKLKEKISDSDKQTILDKCKTTIKWLD-SNQLADKE 427
KE I+A+N E+Y +S+K +D E+L K+ DKQ +LD + +WL+ + A KE
Sbjct: 561 KERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKE 620
Query: 428 EYEHKQKELEGIYNPIITQMH 490
E+E ++++L+ + +PI +++
Sbjct: 621 EFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 96.3 bits (229), Expect = 4e-21
Identities = 45/81 (55%), Positives = 61/81 (75%)
Frame = +3
Query: 3 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIYANGILIVSAIEKSTNKENKITITNDKG 182
+ +DN L+G F+LTGI PAP+G PQIEV+FD+ A+GI+ VSA +K+TNK++ IT+ G
Sbjct: 490 LVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG 549
Query: 183 RLSKEEIERMVNEAEKYRNED 245
L+ EIE MV +AEKYR D
Sbjct: 550 -LTDSEIEAMVADAEKYRASD 569
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 87.8 bits (208), Expect = 1e-18
Identities = 38/78 (48%), Positives = 56/78 (71%)
Frame = +3
Query: 12 DNNLLGKFELTGIPPAPRGVPQIEVTFDIYANGILIVSAIEKSTNKENKITITNDKGRLS 191
+N LG+F+LTGIPP PRG ++E TF++ ANGIL V+A+EK+T + I ITN G LS
Sbjct: 455 ENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLS 514
Query: 192 KEEIERMVNEAEKYRNED 245
+I+ M+ A+K++ +D
Sbjct: 515 STKIQEMIENADKFKQQD 532
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 29.9 bits (64), Expect = 0.37
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +2
Query: 224 REVQKRG*QAKETIQAKNAFESYCFSMKSTMEDEKLKEKISDSDKQTILDK---CKTTIK 394
REV+K + +ET + KN + ++ ++ + KEK + K+T + KT
Sbjct: 212 REVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEELNKTKPI 271
Query: 395 WLDSNQLADKEEYEHKQKELEGIYNPIITQMH 490
W + KEEY K L + + H
Sbjct: 272 WTRNPSEVTKEEYASFYKSLTNDWEDHLAVKH 303
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 29.9 bits (64), Expect = 0.37
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 332 KEKISDSDKQTILD-KCKTTIKWLDSNQLADKEEYEHKQKELE 457
+EKI +++TI D K + + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 430
Score = 29.1 bits (62), Expect = 0.65
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 81 EVTFDIYANGILI-VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQR 257
++ ++ Y +L S IEKS KE K TI + KE + + + QR
Sbjct: 169 QLNYEAYETKLLEDASTIEKSLEKEVK-TIYDSNIASPKESSDAIDADHAMIDESRSTQR 227
Query: 258 RPSRPRMHLNLT 293
R S+P+ H+ T
Sbjct: 228 RKSKPKKHVAFT 239
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.65
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 177 KGRLSKEEIERMVNEAEKYRNEDD 248
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 0.86
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 114 LIVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 245
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 28.7 bits (61), Expect = 0.86
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 272 KNAFESYCFSMKSTMEDEKLKEKISDSDKQTILDKCKTTIKW 397
K FE YC S+ ST + + K +SD T+L +T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPBC336.14c |ppk26||serine/threonine protein kinase
Ppk26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 589
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 272 KNAFESYCFSMKST-MEDEKLKEKISDSDKQTILDKCKTTIKWLDSNQLADKEEYEHKQK 448
+N ES+ M S +E EK++ KISD+ + I ++ N A +E ++K
Sbjct: 454 QNHIESFFPIMSSPYVECEKMERKISDAFQHGRFFNILCKIMFIIDNNRASREYPIAREK 513
Query: 449 ELEGIY 466
E+ IY
Sbjct: 514 EISLIY 519
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 107 RYPHRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 211
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 144 NKENKITITNDKGRLSKEEIERMVNEAE 227
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 26.6 bits (56), Expect = 3.5
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 72 PQIEVTFDIYANGILIVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 251
PQ+E T AN I IVS K ++ E++ TND L + + E+ ++ E+D+
Sbjct: 159 PQMENT----AN-ITIVSPSLKESDFESEEKATNDNNGLIETNHNSKLEESSEHEEEEDE 213
Query: 252 QRRPSR 269
+ R
Sbjct: 214 ESNIER 219
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 257 ETIQAKNAFESYCFSMKSTMEDEKLKEKISDSDKQTILDKCKTTIK-WL-DSNQLADKEE 430
ET+ KNA E Y + ++ ++D + ++ ++ + + T + WL + + K
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDD--IYAPFTNEEESSKFKEMLTKAEDWLYEEGEDTTKAV 632
Query: 431 YEHKQKELEGIYNPI 475
Y K ++L + PI
Sbjct: 633 YTAKLEDLMRVGGPI 647
>SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 248 QAKETIQAKNAFESYCFSMKSTMEDEKLK-EKISDSDKQTILDKCKTTIK 394
+ E I +F+S S+K TME++K K DK+ + K K+ ++
Sbjct: 44 EGSELIFGGRSFDSLLSSIKETMEEKKKKSSSFEKRDKRRVQLKEKSPLR 93
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 4.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 700 FQNQRRRLPNRGLFTREGFK 641
FQ++RR P +GL ++GFK
Sbjct: 25 FQSRRRHRPRQGLKRKKGFK 44
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 4.6
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 311 TMEDEKLKEKISDSDKQTILDKCKTTIKWLDSNQLADKEEYEHKQKELEGIYNPIITQ 484
+ E+ +K + + D L+ K + L N YEH QK + ++N + Q
Sbjct: 616 SFENSNVKTQSVEPDNGLSLEALKNENQTLLKNLEDSTARYEHLQKSFKNVFNQLRKQ 673
>SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subunit
Rpb11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 350 SDKQTILDKCKTTIKWLDSNQLADKEEYEHKQKELEGI 463
S KQ I+D K+ I L+ ++ E+E K +EG+
Sbjct: 81 SPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGV 118
>SPBC12D12.02c |cdm1||DNA polymerase delta subunit
Cdm1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 25.8 bits (54), Expect = 6.1
Identities = 25/97 (25%), Positives = 42/97 (43%)
Frame = +2
Query: 230 VQKRG*QAKETIQAKNAFESYCFSMKSTMEDEKLKEKISDSDKQTILDKCKTTIKWLDSN 409
++KR QAK++ Q N + + ++S + +K+S T T K LD
Sbjct: 1 MKKRTTQAKKSGQNTNIRDVFPHVVRSNSSQSHIGKKVSSEQSPT--PDVTITTKTLDER 58
Query: 410 QLADKEEYEHKQKELEGIYNPIITQMHXLSLSVPVVC 520
D E KE+E +N I+ + +S P+ C
Sbjct: 59 IKEDDE----LSKEVEEAWNQIMAE----RISEPIHC 87
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 117 IVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 254
IV A+ KS +++ ++ G + EEI ++++ E E+D++
Sbjct: 596 IVPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEE 641
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 641 SVDWESLVLKRNHIR*VGPSNIQPTGGR 558
SVDW +L KRN V ++++PT G+
Sbjct: 178 SVDWSALTFKRNS---VTKADVKPTFGK 202
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/49 (26%), Positives = 31/49 (63%)
Frame = +2
Query: 311 TMEDEKLKEKISDSDKQTILDKCKTTIKWLDSNQLADKEEYEHKQKELE 457
T+++E++++ +++ ++ + KTTI+ L+ + E YE++ ELE
Sbjct: 188 TLKEERIQQMRNEASQRRF--EFKTTIECLEESSNRAIETYENRIAELE 234
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 574 WMLLGPTYRMWFRFKTKLS 630
W P Y+ W RF TK S
Sbjct: 131 WTYAKPIYQKWLRFSTKKS 149
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/64 (20%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 284 ESYCFSMKSTMEDEKLK---EKISDSDKQTILDKCKTTIKWLDSNQLADKEEYEHKQKEL 454
E+ + + +M D+ L E+ SDSD++ D + ++ + + ++ + ++ E
Sbjct: 1803 EALSGAAQDSMGDQSLSSSSEESSDSDREEPPDLYRNSVLGIFQGDIVNENDENYEDSED 1862
Query: 455 EGIY 466
+G+Y
Sbjct: 1863 DGVY 1866
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,824,149
Number of Sequences: 5004
Number of extensions: 55995
Number of successful extensions: 261
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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