Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30203
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   5.4  
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    23   7.1  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   7.1  
AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    23   9.4  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   9.4  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 104 QRYPHRFRYREVHQQGEQDHHYQRQR 181
           QR P R+      QQ +Q H  Q+Q+
Sbjct: 354 QRQPQRYVVAGSSQQQQQQHQQQQQK 379


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 575 QPTGGRRTENRYRDPESPSI 516
           +P  GRR  N+ + P SP++
Sbjct: 101 KPMRGRRDPNKQKRPRSPNV 120


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 102 ANGILIVSAIEKSTNKENKITITNDKGRLSKEEI 203
           A+G+L+V       N+E  + I+N   +LSK ++
Sbjct: 19  AHGLLVVGPKFIRANQEYTLVISNFNSQLSKVDL 52


>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +3

Query: 60  PRGVPQIEVTFDIYANGILIVSAIEK---STNKENKITITNDKGRLSKEEIERMVNEAEK 230
           P+G  + ++   + ++GIL ++   K     N+E  I IT+  G+  K+   +   E   
Sbjct: 65  PKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITH-TGQPMKQVTGKAAPENGH 123

Query: 231 YRNEDDK 251
            + E +K
Sbjct: 124 SKKEGEK 130


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 171 NDKGRLSKEEIERMVNEAEKYRNEDDKQRR 260
           N++ R  +EE ++M NE+ K   +   Q++
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQ 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,568
Number of Sequences: 2352
Number of extensions: 16045
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)