Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30202
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.97 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.9  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 655 LYFLLFKYWITYFFLQLFKFMVFYYIVI 572
           ++FLL  Y+  Y F+ L     FYY  I
Sbjct: 94  VHFLLCTYYFYYAFIILLCVYYFYYAFI 121



 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 661 IILYFLLFKYWITYFFLQLFKFMVFYY 581
           I    LLF   I YF + LF  +  YY
Sbjct: 122 IFTVHLLFLLCIYYFVVPLFFLLCIYY 148


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 678 FKKLVT*FYTFYYLNIGLPTFFYNYLNLWY 589
           FK + T F   YY   G P  F+N   + Y
Sbjct: 150 FKNMWTRFQLKYYQVTGTPIIFHNLTLITY 179


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 678 FKKLVT*FYTFYYLNIGLPTFFYNYLNLWY 589
           FK + T F   YY   G P  F+N   + Y
Sbjct: 150 FKNMWTRFQLKYYQVTGTPIIFHNLTLITY 179


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = -3

Query: 618 FFYNYLNLWYFTIL*FLYPTADLKDPQGPKCQNRLPVNTLPFY 490
           F   YL   Y TI   +Y    L    GP   + +  N LP Y
Sbjct: 14  FLLFYLFYCYKTIKQHIYSLISLSYLPGPPVNDIISGNILPLY 56


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 544 SPRTEVSEPFARQ 506
           +P TEVS PF RQ
Sbjct: 255 APSTEVSAPFFRQ 267


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 415  NALTITIKNLFSDQKFQIFIPWPSTIK 495
            NAL + +  L    K QI + WP  ++
Sbjct: 1276 NALFVLVVFLLQLNKDQIHVKWPLGVR 1302


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 415  NALTITIKNLFSDQKFQIFIPWPSTIK 495
            NAL + +  L    K QI + WP  ++
Sbjct: 1276 NALFVLVVFLLQLNKDQIHVKWPLGVR 1302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,055
Number of Sequences: 336
Number of extensions: 4297
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)