Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30201
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003790-1|AAO41473.1|  760|Drosophila melanogaster GH08887p pro...    31   1.2  
AE014297-2709|AAF55701.1|  770|Drosophila melanogaster CG4608-PA...    31   1.2  
U82273-1|AAC47427.1|  770|Drosophila melanogaster FGF homolog pr...    31   1.6  
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    29   8.5  

>BT003790-1|AAO41473.1|  760|Drosophila melanogaster GH08887p
           protein.
          Length = 760

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 18/75 (24%), Positives = 36/75 (48%)
 Frame = +2

Query: 83  CRSRTSCGTRATRTSSKITSRANSNSSLDQQIIKLIGKHYNQALKLDANVGEYNDRLTGE 262
           C S TS  + +  +SS  +S+++SNSS     +  I    + +    +  G  +  L+G 
Sbjct: 428 CSSNTSGSSSSISSSSSSSSKSSSNSSSSYVPVSAISSLSSISNSSQSESGHISSSLSGS 487

Query: 263 TEKTTPATMSAGDSS 307
           +   + +  S+ +SS
Sbjct: 488 SNSNSSSNSSSSNSS 502


>AE014297-2709|AAF55701.1|  770|Drosophila melanogaster CG4608-PA
           protein.
          Length = 770

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 18/75 (24%), Positives = 36/75 (48%)
 Frame = +2

Query: 83  CRSRTSCGTRATRTSSKITSRANSNSSLDQQIIKLIGKHYNQALKLDANVGEYNDRLTGE 262
           C S TS  + +  +SS  +S+++SNSS     +  I    + +    +  G  +  L+G 
Sbjct: 428 CSSNTSGSSSSISSSSSSSSKSSSNSSSSYVPVSAISSLSSISNSSQSESGHISSSLSGS 487

Query: 263 TEKTTPATMSAGDSS 307
           +   + +  S+ +SS
Sbjct: 488 SNSNSSSNSSSSNSS 502


>U82273-1|AAC47427.1|  770|Drosophila melanogaster FGF homolog
           protein.
          Length = 770

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/75 (24%), Positives = 36/75 (48%)
 Frame = +2

Query: 83  CRSRTSCGTRATRTSSKITSRANSNSSLDQQIIKLIGKHYNQALKLDANVGEYNDRLTGE 262
           C S TS  + +  +SS  +S+++SNSS     +  I    + +    +  G  +  L+G 
Sbjct: 428 CSSNTSGSSSSISSSSSSSSKSSSNSSSSYVPVSAISSLSSISNSSQSESGHISSSLSGT 487

Query: 263 TEKTTPATMSAGDSS 307
           +   + +  S+ +SS
Sbjct: 488 SNSNSSSNSSSSNSS 502


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
            protein.
          Length = 1333

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 152  SNSSLDQQIIKLIGKHYNQALKLDANVGEYNDRLTGETEKT 274
            S  SL+ ++  +    YNQ+LK++  + E  D++    EKT
Sbjct: 927  SFQSLENKLSIIKSNGYNQSLKIENQLKELKDKIQENVEKT 967


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,485,432
Number of Sequences: 53049
Number of extensions: 749703
Number of successful extensions: 2367
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2358
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)