Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30200
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    29   0.036
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    29   0.036
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 227 DSVTESKIKI*GQKKIRSIKTV*QSVLMFFTIFPKLY 337
           DSVT S +   G+ K+R++K     VL+FF  +   Y
Sbjct: 256 DSVTRSSLAFLGKAKVRTLKMTIIIVLVFFVCWTPYY 292


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 227 DSVTESKIKI*GQKKIRSIKTV*QSVLMFFTIFPKLY 337
           DSVT S +   G+ K+R++K     VL+FF  +   Y
Sbjct: 256 DSVTRSSLAFLGKAKVRTLKMTIIIVLVFFVCWTPYY 292


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 274 TINKNCIAICVDVFHYLPK 330
           +I KNC++ C +++H   K
Sbjct: 278 SIVKNCLSYCFNLYHLASK 296


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 274 TINKNCIAICVDVFHYLPK 330
           +I KNC++ C +++H   K
Sbjct: 278 SIVKNCLSYCFNLYHLASK 296


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = -1

Query: 513 NNAFYPVMTSSNLS-IKSIVCYFVSKFKIMKRVLESNIKHLSSKLLSFLTDFVFIC*EHS 337
           NN    V+  S L  IK      V KF      L+  ++H  +++  F+T   F C   +
Sbjct: 2   NNKLNMVLVKSMLQRIKMEEKLVVEKFL---NSLQIYLQH--NQIFGFVT---FTCTRSN 53

Query: 336 YNFGKIVKNINTDCYTVFIDRIFFWPYIFI 247
           +   K++   N     +F+  + +W Y+ +
Sbjct: 54  FRSSKLLILYNIILQVLFVSFVSYWLYLVL 83


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -1

Query: 462 IVCYFVSKFKIMKRVLESNIKHLSSKLLSFLTDF 361
           +VC  +  F     V  +  K+L +   +F  DF
Sbjct: 6   VVCCLLLMFSYTDNVSSTRTKYLRTNFPNFYNDF 39


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = -1

Query: 390 SKLLSFLTDFVFIC*EHSYNFGKIVKNINTDCYTVFIDRIFFWPYIFI 247
           +++  F+T   F C   ++   K++   N     +F+  + +W Y+ +
Sbjct: 21  NQIFGFVT---FTCTRSNFRSSKLLILYNIILQVLFVSFVSYWLYLVL 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,955
Number of Sequences: 336
Number of extensions: 3287
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)