Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30200
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058358-1|AAL13587.1|  415|Drosophila melanogaster GH12788p pro...    31   1.5  
AE013599-1384|AAF58593.1| 1218|Drosophila melanogaster CG17509-P...    31   1.5  

>AY058358-1|AAL13587.1|  415|Drosophila melanogaster GH12788p
           protein.
          Length = 415

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 380 RSFEDKCFMLDSRTLFIILNLETK*QTIDLIDRFDEVITG*KALFLKPVVLT 535
           RS    C  LD   L+++  LET+ +  DL+  + E     +  +LK V +T
Sbjct: 148 RSLPRNCLPLDFMGLYVLAGLETERKLQDLVRHYAETDVNKRREYLKTVAMT 199


>AE013599-1384|AAF58593.1| 1218|Drosophila melanogaster CG17509-PA
            protein.
          Length = 1218

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 380  RSFEDKCFMLDSRTLFIILNLETK*QTIDLIDRFDEVITG*KALFLKPVVLT 535
            RS    C  LD   L+++  LET+ +  DL+  + E     +  +LK V +T
Sbjct: 951  RSLPRNCLPLDFMGLYVLAGLETERKLQDLVRHYAETDVNKRREYLKTVAMT 1002


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,243,626
Number of Sequences: 53049
Number of extensions: 505580
Number of successful extensions: 822
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)