Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30198
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   0.91 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   1.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   1.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   1.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.4  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 338 WNIPLAYTFILFKVWLFHVLYAV 270
           W IPL   F   K+W    LY +
Sbjct: 347 WQIPLGRRFRALKLWFVLRLYGI 369


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -1

Query: 231 YGTASVG--VRAYPQLAYNHIQHLFSEW 154
           YG +  G   RA   + YN +  L+S+W
Sbjct: 284 YGGSEAGPYTRAMGVIGYNEVCELYSDW 311


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -1

Query: 231 YGTASVG--VRAYPQLAYNHIQHLFSEW 154
           YG +  G   RA   + YN +  L+S+W
Sbjct: 284 YGGSEAGPYTRAMGVIGYNEVCELYSDW 311


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 332 CSKYPLVKAVGRENGPPRCTNIPKK 406
           CS    V +VG EN PP  T +  K
Sbjct: 19  CSSDDTVLSVGNENPPPEDTPLSFK 43


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 503 LAQIEGHVPMFVTNLTIEHFWKPLVSIGTPSS 408
           L Q+ GH+P   TN+ I    + L  + + ++
Sbjct: 307 LLQVYGHIPKTQTNIAIATLIQSLAPLNSAAN 338


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -2

Query: 314 FILFKVWLFHVLYAVLLMDFY 252
           +++   W F  LY++ ++ FY
Sbjct: 141 YLILAAWFFSALYSLPILIFY 161


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +2

Query: 329  GCSKYPLVKAVGRE-NGPP 382
            GC K+PL+K +  E  G P
Sbjct: 2673 GCGKHPLLKTLNNELRGTP 2691



 Score = 22.2 bits (45), Expect = 2.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 329  GCSKYPLVKAVGR 367
            GC +YPL++ + R
Sbjct: 2175 GCEEYPLLRTINR 2187


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -2

Query: 296 WLFHVLYAVLLMDFYNTLLSINTELL 219
           WLFH  +   ++   N ++ + T+L+
Sbjct: 667 WLFHCHFLFHIVIGMNLIIHVGTQLI 692


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 333 HPIGIHFHTFQSVA 292
           HP  +H H+F+ VA
Sbjct: 532 HPFHLHGHSFRVVA 545


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,599
Number of Sequences: 336
Number of extensions: 3315
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)