Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30198
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            28   0.16 
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   2.6  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   2.6  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   6.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   6.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 339  LEHPIGIHFHTFQSVAFSCSLRCASDGFL*YSSLHQYGTASVGVRAY 199
            ++ P   HF++ Q + F  +L    DGF  Y    QY   SV V  Y
Sbjct: 1766 IDGPFAQHFNSIQGIDFLTNLFPTQDGF--YYESEQYPDQSVYVLVY 1810


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 338 WNIPLAYTFILFKVWLFHVLYAV 270
           W IPL   F   K+W    LY V
Sbjct: 353 WQIPLGRRFRALKLWFVLRLYGV 375


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 338 WNIPLAYTFILFKVWLFHVLYAV 270
           W IPL   F   K+W    LY V
Sbjct: 384 WQIPLGRRFRALKLWFVLRLYGV 406


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +3

Query: 216 LKQFRIDGEKSIIKIHQKHSVKNMKKPHFEKYES 317
           +K+    GE+++IK++   S++   + H    ES
Sbjct: 119 MKRNHYPGEENVIKVYSSKSLRKSPQAHTTDDES 152


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -2

Query: 347 VDIWNIPLAYTFILFKVWLFHVLYAVLLMDFYNTLLSINTELLQLV 210
           V   N+   YT++L+  W F  +Y  +    +  +LSI   +  L+
Sbjct: 134 VSTLNVTFNYTYMLYLDWPFGTMYCKISQ--FVAILSICASVFTLM 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,659
Number of Sequences: 2352
Number of extensions: 12732
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)