Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30198
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016100-1|AAV36985.2|  391|Drosophila melanogaster LD30448p pro...   100   1e-21
AE014296-994|AAF50751.1|  391|Drosophila melanogaster CG10576-PA...   100   1e-21
AE014296-995|AAN12106.1|  207|Drosophila melanogaster CG10576-PB...    53   2e-07
AY069666-1|AAL39811.1|  492|Drosophila melanogaster LD44305p pro...    30   1.6  
AE014297-810|AAG22135.1|  492|Drosophila melanogaster CG8223-PA ...    30   1.6  
AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-P...    28   6.5  
AE013599-3330|AAF46799.1|  720|Drosophila melanogaster CG6613-PA...    28   6.5  

>BT016100-1|AAV36985.2|  391|Drosophila melanogaster LD30448p
           protein.
          Length = 391

 Score =  100 bits (240), Expect = 1e-21
 Identities = 62/137 (45%), Positives = 84/137 (61%)
 Frame = +3

Query: 96  VKRALRLLKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIIKIHQKHS 275
           V+ ALRLLK G  NY++T+A+Q+IS  Y CKPIEGMLSH+LKQF+IDGEK+II+   +  
Sbjct: 150 VQAALRLLKSGANNYSLTDAVQQISESYKCKPIEGMLSHELKQFKIDGEKTIIQNPSEAQ 209

Query: 276 VKNMKKPHFEKYESVCQWDVPNIHW*KQLDVKMDHPDVPIYPKN**GCTN*N*RLPEMFY 455
            K  +K  FE YE V   DV  +   + +  + D   V IY K+         +      
Sbjct: 210 RKEHEKCTFETYE-VYAIDV-IVSTGEGVGREKD-TKVSIYKKSEENYML-KMKASRALL 265

Query: 456 SEVRNKHGNMPFNLRQF 506
           +EV+ K+GNMPFN+R F
Sbjct: 266 AEVKTKYGNMPFNIRSF 282



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
 Frame = +2

Query: 2   GFIAVVAHTVVVG---ESEVSGRAADVLL 79
           GFIAV AHT+VVG   + ++SGR ADV+L
Sbjct: 116 GFIAVAAHTIVVGAAADQKISGRQADVIL 144



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 28/67 (41%), Positives = 36/67 (53%)
 Frame = +2

Query: 254 KNPSEAQRKEHEKATL*KV*KCMPMGCSKYPLVKAVGRENGPPRCTNIPKKLMRVYQLKL 433
           +NPSEAQRKEHEK T  +  +   +        + VGRE       +I KK    Y LK+
Sbjct: 203 QNPSEAQRKEHEKCTF-ETYEVYAIDVI-VSTGEGVGREKDTK--VSIYKKSEENYMLKM 258

Query: 434 KASRNVL 454
           KASR +L
Sbjct: 259 KASRALL 265


>AE014296-994|AAF50751.1|  391|Drosophila melanogaster CG10576-PA,
           isoform A protein.
          Length = 391

 Score =  100 bits (240), Expect = 1e-21
 Identities = 62/137 (45%), Positives = 84/137 (61%)
 Frame = +3

Query: 96  VKRALRLLKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIIKIHQKHS 275
           V+ ALRLLK G  NY++T+A+Q+IS  Y CKPIEGMLSH+LKQF+IDGEK+II+   +  
Sbjct: 150 VQAALRLLKSGANNYSLTDAVQQISESYKCKPIEGMLSHELKQFKIDGEKTIIQNPSEAQ 209

Query: 276 VKNMKKPHFEKYESVCQWDVPNIHW*KQLDVKMDHPDVPIYPKN**GCTN*N*RLPEMFY 455
            K  +K  FE YE V   DV  +   + +  + D   V IY K+         +      
Sbjct: 210 RKEHEKCTFETYE-VYAIDV-IVSTGEGVGREKD-TKVSIYKKSEENYML-KMKASRALL 265

Query: 456 SEVRNKHGNMPFNLRQF 506
           +EV+ K+GNMPFN+R F
Sbjct: 266 AEVKTKYGNMPFNIRSF 282



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 18/29 (62%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
 Frame = +2

Query: 2   GFIAVVAHTVVVG---ESEVSGRAADVLL 79
           GFIAV AHT+VVG   + ++SGR ADV+L
Sbjct: 116 GFIAVAAHTIVVGAAADQKISGRQADVIL 144



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 28/67 (41%), Positives = 36/67 (53%)
 Frame = +2

Query: 254 KNPSEAQRKEHEKATL*KV*KCMPMGCSKYPLVKAVGRENGPPRCTNIPKKLMRVYQLKL 433
           +NPSEAQRKEHEK T  +  +   +        + VGRE       +I KK    Y LK+
Sbjct: 203 QNPSEAQRKEHEKCTF-ETYEVYAIDVI-VSTGEGVGREKDTK--VSIYKKSEENYMLKM 258

Query: 434 KASRNVL 454
           KASR +L
Sbjct: 259 KASRALL 265


>AE014296-995|AAN12106.1|  207|Drosophila melanogaster CG10576-PB,
           isoform B protein.
          Length = 207

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 40/102 (39%), Positives = 56/102 (54%)
 Frame = +3

Query: 201 MLSHQLKQFRIDGEKSIIKIHQKHSVKNMKKPHFEKYESVCQWDVPNIHW*KQLDVKMDH 380
           MLSH+LKQF+IDGEK+II+   +   K  +K  FE YE V   DV  +   + +  + D 
Sbjct: 1   MLSHELKQFKIDGEKTIIQNPSEAQRKEHEKCTFETYE-VYAIDV-IVSTGEGVGREKD- 57

Query: 381 PDVPIYPKN**GCTN*N*RLPEMFYSEVRNKHGNMPFNLRQF 506
             V IY K+         +      +EV+ K+GNMPFN+R F
Sbjct: 58  TKVSIYKKSEENYML-KMKASRALLAEVKTKYGNMPFNIRSF 98



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 28/67 (41%), Positives = 36/67 (53%)
 Frame = +2

Query: 254 KNPSEAQRKEHEKATL*KV*KCMPMGCSKYPLVKAVGRENGPPRCTNIPKKLMRVYQLKL 433
           +NPSEAQRKEHEK T  +  +   +        + VGRE       +I KK    Y LK+
Sbjct: 19  QNPSEAQRKEHEKCTF-ETYEVYAIDVI-VSTGEGVGREKDTK--VSIYKKSEENYMLKM 74

Query: 434 KASRNVL 454
           KASR +L
Sbjct: 75  KASRALL 81


>AY069666-1|AAL39811.1|  492|Drosophila melanogaster LD44305p
           protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 137 VLSTRLQETKSPLH*HDELPTKHLQHVQRLHFHPQLLYELQQL 9
           +L    ++ +  L  H ELPT++ + +  LH+   L Y +QQL
Sbjct: 299 ILEAAREDYEKALKIHGELPTRNRRALAELHYKIGLTYLMQQL 341


>AE014297-810|AAG22135.1|  492|Drosophila melanogaster CG8223-PA
           protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 137 VLSTRLQETKSPLH*HDELPTKHLQHVQRLHFHPQLLYELQQL 9
           +L    ++ +  L  H ELPT++ + +  LH+   L Y +QQL
Sbjct: 299 ILEAAREDYEKALKIHGELPTRNRRALAELHYKIGLTYLMQQL 341


>AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-PA
           protein.
          Length = 1491

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
 Frame = -2

Query: 434 LVSIGTPSSVFWVYWYI-WVVHFHVQLLSPVDIWNIPLAYTF----ILFKVWLFH----V 282
           L ++G  +S+ W+ WY   ++   + LL  + I++I L Y F     L  ++L +    V
Sbjct: 52  LTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIHSLV 111

Query: 281 LYAVLLMDFYNTLLS 237
           L+A  +  F++  LS
Sbjct: 112 LFAFFISSFFSRSLS 126


>AE013599-3330|AAF46799.1|  720|Drosophila melanogaster CG6613-PA
           protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 336 EHPIGIHFHTFQSVAFSCSLRCAS 265
           +HP+GI +  FQ  AFS S  C S
Sbjct: 488 QHPLGIGYSNFQVCAFSGSYYCNS 511


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,674,254
Number of Sequences: 53049
Number of extensions: 555838
Number of successful extensions: 1834
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)