Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30194
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0388 + 33564096-33564485,33564642-33564812,33565125-335651...    29   3.2  

>03_06_0388 +
           33564096-33564485,33564642-33564812,33565125-33565145,
           33565260-33565467,33566156-33566346,33566465-33566584,
           33566703-33566936
          Length = 444

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 329 RNLILNSLALIKTNIFIIY*FCN*WFTECQLFSYGTSIVTSNVIRYKIINTNVSKDV*TL 150
           +N+++NS   +K  I I   +C+    +C+    G+++  SNV+   I  T +SK   TL
Sbjct: 339 QNMVMNS---VKNPIIIDQNYCD-SAKKCET-QEGSAVEISNVVFKNIAGTTISKSAITL 393

Query: 149 LSYIPYNCIMLSSND 105
                Y C  +S  D
Sbjct: 394 NCSKNYPCYDISLQD 408


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,751,306
Number of Sequences: 37544
Number of extensions: 333117
Number of successful extensions: 412
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)