Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30192
(724 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 27 0.12
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 27 0.12
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 23 3.3
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 3.3
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 3.3
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 3.3
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 22 5.8
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 22 5.8
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 7.6
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.6
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 7.6
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 418 DGHLLTRTFLVTERITLADVIVFSTLLHAFR 510
DGH++ TF +E + DV++ + L+ FR
Sbjct: 624 DGHVILETFHFSEADFVMDVVMLAVLIVGFR 654
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 27.5 bits (58), Expect = 0.12
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 418 DGHLLTRTFLVTERITLADVIVFSTLLHAFR 510
DGH++ TF +E + DV++ + L+ FR
Sbjct: 624 DGHVILETFHFSEADFVMDVVMLAVLIVGFR 654
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 77 TDVKVAPNFVFGETNKSED 133
++ ++P+ VFG+ KSED
Sbjct: 201 SEQSLSPDTVFGDDGKSED 219
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -2
Query: 174 SNAGTFPAGNFFKKSSDL 121
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -2
Query: 174 SNAGTFPAGNFFKKSSDL 121
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -2
Query: 174 SNAGTFPAGNFFKKSSDL 121
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 558 TLNVYQRRTDARG 520
T NVY RTDARG
Sbjct: 252 TDNVYLIRTDARG 264
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 263 PKPVSGSGHHGLTVN 307
P PV G G HGL V+
Sbjct: 38 PYPVPGLGLHGLPVD 52
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 410 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 499
K + D+F+ + L+PR P+S S H C
Sbjct: 182 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 212
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 410 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 499
K + D+F+ + L+PR P+S S H C
Sbjct: 342 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 372
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 410 KYWTDIFSHAPSLLPRESHLPMSLS-SVHCC 499
K + D+F+ + L+PR P+S S H C
Sbjct: 342 KVFVDLFNLSTFLIPRSYIPPLSTSMRSHLC 372
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,034
Number of Sequences: 336
Number of extensions: 4166
Number of successful extensions: 26
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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