Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30192
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 38 9e-04
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 39 0.004
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 32 0.36
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 31 0.83
AF039036-3|AAB94166.1| 137|Caenorhabditis elegans Neuropeptide-... 30 1.9
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical pr... 29 4.4
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 4.4
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 5.9
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 5.9
AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical... 28 7.8
AC025716-22|AAK39613.1| 630|Caenorhabditis elegans Zwilch (dros... 28 7.8
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 80.6 bits (190), Expect = 1e-15
Identities = 41/102 (40%), Positives = 62/102 (60%)
Frame = +1
Query: 259 ATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTR 438
+ A QW +++ LLPA +V P + F+K+ VE+ K++L L+VLD L+ +
Sbjct: 43 SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKK 102
Query: 439 TFLVTERITLADVIVFSTLLHAFRTC*TPSVRSSLINVQRWF 564
T+LV ER++LADV V LL AF+ + R S++NV RWF
Sbjct: 103 TYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWF 144
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 80.6 bits (190), Expect = 1e-15
Identities = 41/102 (40%), Positives = 62/102 (60%)
Frame = +1
Query: 259 ATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTR 438
+ A QW +++ LLPA +V P + F+K+ VE+ K++L L+VLD L+ +
Sbjct: 68 SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKK 127
Query: 439 TFLVTERITLADVIVFSTLLHAFRTC*TPSVRSSLINVQRWF 564
T+LV ER++LADV V LL AF+ + R S++NV RWF
Sbjct: 128 TYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWF 169
Score = 34.7 bits (76), Expect = 0.068
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +2
Query: 8 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 187
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 188 KVLLTESNAIAYYVANES 241
LL + +I ++ S
Sbjct: 51 DALLFGAESIGLHLTGTS 68
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 37.5 bits (83), Expect(2) = 9e-04
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 259 ATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALK-VLDGH 426
+ A QW +++ LLPA +V P + F+K+ VE+ K++L L+ VLD +
Sbjct: 68 SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQYVLDAN 124
Score = 34.7 bits (76), Expect = 0.068
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +2
Query: 8 GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 187
G LY +NFR K LIAA+ + V +A G+ ++ KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50
Query: 188 KVLLTESNAIAYYVANES 241
LL + +I ++ S
Sbjct: 51 DALLFGAESIGLHLTGTS 68
Score = 22.6 bits (46), Expect(2) = 9e-04
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 526 SVRSSLINVQRWF 564
+ R S++NV RWF
Sbjct: 124 NARKSIVNVTRWF 136
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 AAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFES 178
A +LY+Y + A++ IA D + P +F E +K+ +F+K PA KVP
Sbjct: 2 AKPILYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL-- 59
Query: 179 ADGKVLLTESNAIAYYVANESLRGGVWLPK 268
+ LTES AI Y+ +E+ +LPK
Sbjct: 60 VINGLSLTESLAIIEYL-DEAYPDPPFLPK 88
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 260 ARLLRG-DFHWQRSKRWHCFQLGALFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 93
+RLLR DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 146 SRLLRILDFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.83
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +2
Query: 134 FLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGVWLPKPVSGSGHHGLTVNYC 313
+L K P G+VPA E +GKV + ESN I Y+ +E LP+ H + V
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL-DELFPTNTILPRDAYEKAHQKILVER- 193
Query: 314 LLPVLGS 334
L P++ +
Sbjct: 194 LSPIMNA 200
>AF039036-3|AAB94166.1| 137|Caenorhabditis elegans
Neuropeptide-like protein protein13 protein.
Length = 137
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 621 QSVKRADDGRTLVAGGRRSEPTLNVYQRRTDARG 520
QS KR D R +++ G+RS T ++Y RR A G
Sbjct: 27 QSAKRNDFSRDIMSFGKRSGNTADLYDRRIMAFG 60
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +1
Query: 169 IRKCRWKSAPN*K---QCHRLLRCQ*KSPRRSLATQAR 273
+RKC SAP + QCHR+ P+R+LA +AR
Sbjct: 1343 LRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEAR 1380
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 26 PENFRAYKALI--AAQYS--GTDVKVAPNFVFGET--NKSEDFLKKFPAGKVPAFESADG 187
P FR Y AAQ + VK P+ V K + + K G+VP E A+G
Sbjct: 24 PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83
Query: 188 KVLLTESNAIAYYV 229
K L+ ES I Y+
Sbjct: 84 KKLVIESAVIPEYL 97
>Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.5 protein.
Length = 408
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 233 WQRSKRWHCFQLGALFHRHFRMQALFRQETSSRSLRTCWSRQIRNSV 93
W+R +R H ++G+ RHF+ + + SL CW R + V
Sbjct: 304 WKRYQRKH--KMGSEETRHFKGSSSLSNMNAQSSLMVCWKRSTDDRV 348
>Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical
protein R07A4.2 protein.
Length = 157
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -1
Query: 148 KLLQEVFGLVGLAKYEIRCYFHISPGILCGDQRFISAEVFRISV 17
K+LQ +FG + L+ CY + + CG++ F S++VF++ V
Sbjct: 22 KILQLIFGFINLSA-NYWCYPN-QHFLYCGERYFTSSQVFQLIV 63
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 289 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 408
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 122 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 229
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 122 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 229
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 331 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 459
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical
protein F41E6.1 protein.
Length = 239
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 149 ETSSRSLRTCWSRQIRNSVLLSHQSRNIVR 60
ET +R CWSR N+V R++VR
Sbjct: 167 ETGGAIVRDCWSRVFSNAVKNPRARRDVVR 196
>AC025716-22|AAK39613.1| 630|Caenorhabditis elegans Zwilch
(drosophila) homolog protein1 protein.
Length = 630
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 213 PSLTTLPMKVSAEESGYPSPC-LAVG 287
PS++TLP+ +S S +PS C LA G
Sbjct: 166 PSISTLPVWISTTSSKFPSICWLAAG 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,779,815
Number of Sequences: 27780
Number of extensions: 399905
Number of successful extensions: 1130
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -