Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30192
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ... 73 1e-13
At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative / ... 72 4e-13
At1g02930.1 68414.m00260 glutathione S-transferase, putative sim... 45 6e-05
At4g02520.1 68417.m00345 glutathione S-transferase, putative 44 8e-05
At2g02930.1 68415.m00241 glutathione S-transferase, putative 44 1e-04
At2g02380.1 68415.m00176 glutathione S-transferase, putative sim... 42 3e-04
At1g02920.1 68414.m00259 glutathione S-transferase, putative sim... 42 5e-04
At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1... 41 7e-04
At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1... 41 7e-04
At1g02940.1 68414.m00261 glutathione S-transferase, putative sim... 38 0.005
At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1... 38 0.007
At1g02950.2 68414.m00263 glutathione S-transferase, putative sim... 38 0.009
At1g02950.1 68414.m00262 glutathione S-transferase, putative sim... 38 0.009
At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do... 36 0.021
At2g18110.1 68415.m02105 elongation factor 1-beta, putative / EF... 34 0.11
At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta id... 32 0.44
At3g60970.1 68416.m06823 ABC transporter family protein ABC tran... 30 1.4
At3g60160.1 68416.m06717 ABC transporter family protein similar ... 30 1.4
At5g46550.1 68418.m05731 DNA-binding bromodomain-containing prot... 29 2.4
At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N domain-... 29 2.4
At1g16840.2 68414.m02028 expressed protein 29 2.4
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 29 4.1
At4g22130.1 68417.m03199 protein kinase family protein contains ... 29 4.1
At4g35790.3 68417.m05086 phospholipase D delta / PLD delta (PLDD... 28 5.5
At4g35790.2 68417.m05085 phospholipase D delta / PLD delta (PLDD... 28 5.5
At4g35790.1 68417.m05084 phospholipase D delta / PLD delta (PLDD... 28 5.5
At3g06550.1 68416.m00761 O-acetyltransferase-related similar to ... 28 7.2
At3g52170.1 68416.m05727 expressed protein 27 9.5
At3g19440.1 68416.m02465 pseudouridine synthase family protein l... 27 9.5
At2g35340.1 68415.m04333 RNA helicase, putative similar to ATP-d... 27 9.5
>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative similar to elongation factor 1B
gamma GI:3868758 from [Oryza sativa]
Length = 413
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +2
Query: 11 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 190
V++TY N A KALIAA+Y+G ++ + +F G TNKS +FLK P GKVP E+ +G
Sbjct: 4 VMHTYKGNKGANKALIAAEYAGVKIEESADFQMGVTNKSPEFLKMNPIGKVPVLETPEGP 63
Query: 191 VLLTESNAIAYYVANES 241
+ ESNAIA YV+ ++
Sbjct: 64 IF--ESNAIARYVSRKN 78
Score = 60.9 bits (141), Expect = 8e-10
Identities = 35/104 (33%), Positives = 50/104 (48%)
Frame = +1
Query: 253 SLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLL 432
SL A + QW +S E+ W P +G F+ E A S L L+ L+ HL
Sbjct: 87 SLIEYAHIEQWIDFSSLEIDANMLKWFAPRMGYAPFSAPAEEAAISALKRGLEALNTHLA 146
Query: 433 TRTFLVTERITLADVIVFSTLLHAFRTC*TPSVRSSLINVQRWF 564
+ TFLV +TLAD++ L F T T S+ +V+R+F
Sbjct: 147 SNTFLVGHSVTLADIVTICNLNLGFATVMTKKFTSAFPHVERYF 190
>At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative /
eEF-1B gamma, putative Similar to elongation factor
1-gamma (gb|EF1G_XENLA). ESTs
gb|T20564,gb|T45940,gb|T04527 come from this gene
Length = 414
Score = 71.7 bits (168), Expect = 4e-13
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +2
Query: 11 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 190
VL+TY N A KALIAA+Y G + V +F G TNK+ FLK P GKVP E+ +G
Sbjct: 4 VLHTYKGNKSAEKALIAAEYVGVQIDVPSDFQMGVTNKTPAFLKMNPIGKVPVLETPEGS 63
Query: 191 VLLTESNAIAYYVA 232
V ESNAIA YV+
Sbjct: 64 VF--ESNAIARYVS 75
Score = 64.1 bits (149), Expect = 9e-11
Identities = 37/104 (35%), Positives = 52/104 (50%)
Frame = +1
Query: 253 SLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLL 432
SL A++ QW +S E+ + W P +G M ++ E A S L AL L+ HL
Sbjct: 87 SLIEYAQIEQWIDFSSLEIYASILRWFGPRMGFMPYSAPAEEGAISTLKRALDALNTHLT 146
Query: 433 TRTFLVTERITLADVIVFSTLLHAFRTC*TPSVRSSLINVQRWF 564
+ T+LV ITLAD+I L F T T S +V+R+F
Sbjct: 147 SNTYLVGHSITLADIITVCNLNLGFATVMTKKFTSEFPHVERYF 190
>At1g02930.1 68414.m00260 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 208
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 181
AG+ ++ +P + + LIA D + + +K E F+ + P GKVPAFE
Sbjct: 2 AGIKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDG 61
Query: 182 DGKVLLTESNAIAYYVANE 238
D K+ ES AI Y+A+E
Sbjct: 62 DFKIF--ESRAITQYIAHE 78
>At4g02520.1 68417.m00345 glutathione S-transferase, putative
Length = 212
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 181
AG+ ++ +P + + LIA D ++ + +K E FL + P G+VPAFE
Sbjct: 2 AGIKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFE-- 59
Query: 182 DGKVLLTESNAIAYYVAN 235
DG + L ES AI Y+A+
Sbjct: 60 DGDLKLFESRAITQYIAH 77
>At2g02930.1 68415.m00241 glutathione S-transferase, putative
Length = 212
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 181
AG+ ++ +P + + LIA D ++ + +K E FL + P G+VPAFE
Sbjct: 2 AGIKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFE-- 59
Query: 182 DGKVLLTESNAIAYYVAN 235
DG + L ES AI Y+A+
Sbjct: 60 DGDLKLFESRAITQYIAH 77
>At2g02380.1 68415.m00176 glutathione S-transferase, putative
similar to gi:167970 gb:AAA72320 gb:AY052332
Length = 223
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +2
Query: 14 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 190
LY+Y + A++ IA G D + P N + G+ + S DF K P G VPA DG
Sbjct: 14 LYSYWRSSCAHRVRIALTLKGLDYEYIPVNLLKGDQSDS-DFKKINPMGTVPAL--VDGD 70
Query: 191 VLLTESNAIAYYVANESLRGGVWLPKPVSGSGHHGLTVNYCLLPVLGSSL 340
V++ +S AI Y+ ++ + P+ S +H VNY ++ S +
Sbjct: 71 VVINDSFAIIMYLDDK------YPEPPLLPSDYHKRAVNYQATSIVMSGI 114
>At1g02920.1 68414.m00259 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]; supported by cDNA GI:443697.
Length = 209
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 AGV-LYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESA 181
AG+ ++ +P + + LIA D + + +K E F+ + P GKVPAFE
Sbjct: 2 AGIKVFGHPASTATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFE-- 59
Query: 182 DGKVLLTESNAIAYYVAN 235
DG L ES AI Y+A+
Sbjct: 60 DGDFKLFESRAITQYIAH 77
>At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 191
Score = 41.1 bits (92), Expect = 7e-04
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Frame = +2
Query: 14 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 190
LY+Y + A++ IA G D + P N + G+ S DF K P G VPA DG
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGD 67
Query: 191 VLLTESNAIAYYVANESLRGGVWLPKPVSGSGHHGLTVNYCLLPVLGSSL----TLVSCN 358
V++ +S AI Y+ +E LP+ + H VNY + ++ S + L
Sbjct: 68 VVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQNLAVIR 121
Query: 359 STNRMLNVQSLTYW 400
+NV+ T W
Sbjct: 122 YIEEKINVEEKTAW 135
>At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 221
Score = 41.1 bits (92), Expect = 7e-04
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Frame = +2
Query: 14 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 190
LY+Y + A++ IA G D + P N + G+ S DF K P G VPA DG
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGD 67
Query: 191 VLLTESNAIAYYVANESLRGGVWLPKPVSGSGHHGLTVNYCLLPVLGSSL----TLVSCN 358
V++ +S AI Y+ +E LP+ + H VNY + ++ S + L
Sbjct: 68 VVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQNLAVIR 121
Query: 359 STNRMLNVQSLTYW 400
+NV+ T W
Sbjct: 122 YIEEKINVEEKTAW 135
>At1g02940.1 68414.m00261 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 256
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 LYTYPENFRAYKALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 190
+Y YP + + L G + N + G+ K FL P G+VP F DG
Sbjct: 41 IYGYPYSTNTRRVLAVLHEKGLSYDPITVNLIAGD-QKKPSFLAINPFGQVPVF--LDGG 97
Query: 191 VLLTESNAIAYYVA 232
+ LTES AI+ Y+A
Sbjct: 98 LKLTESRAISEYIA 111
>At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1)
(GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
(Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
{Arabidopsis thaliana}; contains Pfam profiles PF02798:
Glutathione S-transferase, N-terminal domain and
PF00043:Glutathione S-transferase, C-terminal domain
Length = 228
Score = 37.9 bits (84), Expect = 0.007
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Frame = +2
Query: 14 LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKS------EDFLKKFPAGKVPAF 172
LY+Y + A++ IA G D + P N + G+ S +DF K P G VPA
Sbjct: 11 LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSVYRFDLQDFKKINPMGTVPAL 70
Query: 173 ESADGKVLLTESNAIAYYVANESLRGGVWLPKPVSGSGHHGLTVNYCLLPVLGSSL---- 340
DG V++ +S AI Y+ +E LP+ + H VNY + ++ S +
Sbjct: 71 --VDGDVVINDSFAIIMYL-DEKYPEPPLLPRDL-----HKRAVNYQAMSIVLSGIQPHQ 122
Query: 341 TLVSCNSTNRMLNVQSLTYW 400
L +NV+ T W
Sbjct: 123 NLAVIRYIEEKINVEEKTAW 142
>At1g02950.2 68414.m00263 glutathione S-transferase, putative
similar to glutathione-S-transferase GI:169887 from
[Silene vulgaris]
Length = 245
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2
Query: 119 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA 232
+K+E FL P G+VP FE DG V L ES AI Y+A
Sbjct: 64 HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIA 99
>At1g02950.1 68414.m00262 glutathione S-transferase, putative
similar to glutathione-S-transferase GI:169887 from
[Silene vulgaris]
Length = 243
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2
Query: 119 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA 232
+K+E FL P G+VP FE DG V L ES AI Y+A
Sbjct: 62 HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIA 97
>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
domain-containing protein contains Pfam domain PF00043:
Glutathione S-transferase, C-terminal domain
Length = 399
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/46 (34%), Positives = 31/46 (67%)
Frame = +1
Query: 361 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLL 498
+++ + A ++L + L ++ HL + +L ER+TLADV +F+TL+
Sbjct: 261 SQEAYDGAVNELFSTLDEIEDHLGSNRYLCGERLTLADVCLFTTLI 306
>At2g18110.1 68415.m02105 elongation factor 1-beta, putative /
EF-1-beta, putative nearly identical to eEF-1beta
[Arabidopsis thaliana] GI:398606
Length = 231
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 400 AALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFRTC*TPSVRSSLINVQRWF 564
+ LK LD HLLTR+++ + + D+ VF+ L + S +NV RWF
Sbjct: 11 SGLKKLDEHLLTRSYITGYQASKDDITVFTAL--------SKPPTSEFVNVSRWF 57
>At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta
identical to SP|P48006 Elongation factor 1-beta
(EF-1-beta) {Arabidopsis thaliana}
Length = 231
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 400 AALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFRTC*TPSVRSSLINVQRWF 564
A LK LD HLLTR+++ + + D+ VF+ L P+ S +N RW+
Sbjct: 11 AGLKKLDEHLLTRSYITGYQASKDDITVFAALAK------PPT--SQYVNASRWY 57
>At3g60970.1 68416.m06823 ABC transporter family protein ABC
transporter-like proteins
Length = 1037
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 209 NAIAYYVANESLRGGVWLPKPVSGSGHHGLTVNYCL-LPVLGSSLTLVSCNSTNRMLNVQ 385
N ++++V SL V LP+ V GL V Y L L VL +++ CN+ N+M++V+
Sbjct: 696 NLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVE 755
Query: 386 SL 391
+
Sbjct: 756 RI 757
>At3g60160.1 68416.m06717 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]
Length = 1490
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 209 NAIAYYVANESLRGGVWLPKPVSGSGHHGLTVNYCL-LPVLGSSLTLVSCNSTNRMLNVQ 385
N ++++V SL V LP+ V GL V Y L L VL +++ CN+ N+M++V+
Sbjct: 1149 NLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVE 1208
Query: 386 SL 391
+
Sbjct: 1209 RI 1210
>At5g46550.1 68418.m05731 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 494
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 50 ALIAAQYSGTDVKVAPNFVFGETNKSE 130
A++ AQY+GT +K V G+ NK++
Sbjct: 342 AILKAQYAGTIIKAKHRIVLGQNNKAD 368
>At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N
domain-containing protein-related contains weak hit to
Pfam F00627: UBA/TS-N domain; supported by tandem
duplication of ubiquitin-associated (UBA)/TS-N domain
protein (GI:2924790) (TIGR_Ath1:At2g33010) [Arabidopsis
thaliana]
Length = 508
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 344 LVSCNSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRES 463
L++ + N N +S + WPP K W D H + E+
Sbjct: 195 LMASSQVNTQENQESTSVWPPMKTWVDRICHETKVSREEA 234
>At1g16840.2 68414.m02028 expressed protein
Length = 161
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 257 WLPKPVSGSGHHGLTVNYCLLPVLGSSLTLVSCNSTNRMLNVQSLTYWPP*KYWT 421
W+P P SGS HG+ L+ L + LT STN S Y+ YW+
Sbjct: 89 WVPPPGSGSQSHGIAQ---LVVKLANPLTHEESLSTNSSHGWPSSDYFLKGSYWS 140
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +2
Query: 377 NVQSLTYWPP*-------KYWTDIFSHAPSLLPRESHLPMSLSSVHCCML 505
NV S+T PP ++ F PS L RE LPMSL CML
Sbjct: 344 NVPSVTVGPPGSIPCPLCRHGITAFKRLPSSLTREMKLPMSLGFCAPCML 393
>At4g22130.1 68417.m03199 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 338
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +2
Query: 38 RAYKALIAAQYSGTDVKVAPNF-----VFGETNKSEDFLKKFPAGKVPAFESADGKVL-L 199
R + A+QY+ + ++VA N + GE + + +FP GK+ A + D L L
Sbjct: 8 RIRSPITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSL 67
Query: 200 TESNAIAYYVANES 241
E + V+N S
Sbjct: 68 QEEDNFLEAVSNMS 81
>At4g35790.3 68417.m05086 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 693
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 293 HDAHCQTRAWVAR--LLRGDFHWQRSKRWHCFQLGALFHRHFRMQALFR 153
HD HC+ A L+ + W+++ RW F L H++ AL R
Sbjct: 429 HDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIR 477
>At4g35790.2 68417.m05085 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 857
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 293 HDAHCQTRAWVAR--LLRGDFHWQRSKRWHCFQLGALFHRHFRMQALFR 153
HD HC+ A L+ + W+++ RW F L H++ AL R
Sbjct: 429 HDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIR 477
>At4g35790.1 68417.m05084 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 868
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -3
Query: 293 HDAHCQTRAWVAR--LLRGDFHWQRSKRWHCFQLGALFHRHFRMQALFR 153
HD HC+ A L+ + W+++ RW F L H++ AL R
Sbjct: 440 HDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDDALIR 488
>At3g06550.1 68416.m00761 O-acetyltransferase-related similar to
O-acetyltransferase (GI:17063556) [Cryptococcus
neoformans var. neoformans]; contains 7 transmembrane
domains
Length = 419
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 427 LLTRTFLVTERITLADVIVFSTLLHAFRTC 516
LL +FLV R+TL +I F+ L+ F C
Sbjct: 93 LLDESFLVENRLTLRAIIEFAVLMVYFYIC 122
>At3g52170.1 68416.m05727 expressed protein
Length = 499
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 585 VAGGRRSEPTLNVYQRRTDARGLARAESMQQCTEDNDIGKCDSLGNK-EGACEKMSVQ 415
V+G + + + + + D+ ++ + C+EDNDI L N+ E C+ + +
Sbjct: 154 VSGSQLLKEDIGLVHQSMDSTDISMTQLATSCSEDNDIKSNAGLQNRMETVCDSVDTK 211
>At3g19440.1 68416.m02465 pseudouridine synthase family protein low
similarity to SP|P23851 Ribosomal large subunit
pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate
synthase) (Uracil hydrolyase) {Escherichia coli};
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 477
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -2
Query: 648 RGPYVEEPAQSVKRADD--GRTLVAGGRRS-EPTLNVYQRRTDARGLARAESMQQCTEDN 478
R P+V K++ G L G S +P L+++ ++ D +++ Q + D+
Sbjct: 383 REPFVSSENNPTKQSSSPFGLDLDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDS 442
Query: 477 DIGKCDSL 454
DI DSL
Sbjct: 443 DISDLDSL 450
>At2g35340.1 68415.m04333 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1110
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 604 GSLHALCGFLYIRTPKKYPGV*LGAQNKKEGQKSFKK 714
G A +Y R P+K PGV L Q + E KK
Sbjct: 71 GDTRAFAEEIYARAPRKTPGVNLYQQQEAEAAMLLKK 107
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,846,433
Number of Sequences: 28952
Number of extensions: 375635
Number of successful extensions: 1074
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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