Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30190
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.56 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   6.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 9/30 (30%), Positives = 11/30 (36%)
 Frame = -2

Query: 292  WAGGTTAPWWCRRVGAEYNTVLSVAVSRRT 203
            W+  TT+PWW         T      S  T
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTT 1072


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -3

Query: 225 VLQSVVELSF-KYWLYLVL 172
           ++  V+ +SF  YWLYLVL
Sbjct: 47  IILQVLFVSFVSYWLYLVL 65


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -3

Query: 225 VLQSVVELSF-KYWLYLVL 172
           ++  V+ +SF  YWLYLVL
Sbjct: 65  IILQVLFVSFVSYWLYLVL 83


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 122 WKFINLWENNRVYFKIHNTKYNQYLKLSST 211
           WKF N++     Y    NT +++  KL +T
Sbjct: 412 WKFFNIFLITPFYNFNENTIHSKLCKLYAT 441


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 5   VKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 106
           V L +  YNL+L +    D  N      + +EKN
Sbjct: 180 VLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 5   VKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 106
           V L +  YNL+L +    D  N      + +EKN
Sbjct: 180 VLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 122 PPRSTPPLSTPSNSNATKS 140


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 122 PPRSTPPLSTPSNSNATKS 140


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 122 PPRSTPPLSTPSNSNATKS 140


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 122 PPRSTPPLSTPSNSNATKS 140


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 122 PPRSTPPLSTPSNSNATKS 140


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 78  PPRSTPPLSTPSNSNATKS 96


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 122 PPRSTPPLSTPSNSNATKS 140


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 122 PPRSTPPLSTPSNSNATKS 140


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 437 PPKGGRPATSPSCPNAIRS 381
           PP+   P ++PS  NA +S
Sbjct: 122 PPRSTPPLSTPSNSNATKS 140


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 424 EDQLLHHRVQMPYGLP 377
           ++Q  HH+ Q+  GLP
Sbjct: 236 QEQSTHHQGQLVVGLP 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,085
Number of Sequences: 336
Number of extensions: 2391
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)