Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30190
(536 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory elem... 33 0.49
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 33 0.49
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 33 0.49
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 33 0.49
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 33 0.49
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 33 0.49
AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory ele... 33 0.49
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 33 0.49
AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LAS... 33 0.49
CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated pr... 31 2.0
CR788268-4|CAI95048.1| 746|Homo sapiens contactin associated pr... 31 2.0
CR788268-3|CAI95047.1| 380|Homo sapiens contactin associated pr... 31 2.0
CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated pr... 31 2.0
BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated pr... 31 2.0
BX664735-3|CAI95321.1| 746|Homo sapiens contactin associated pr... 31 2.0
BX664735-2|CAI16325.1| 380|Homo sapiens contactin associated pr... 31 2.0
BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated pr... 31 2.0
BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated pr... 31 2.0
BX649569-3|CAI94998.1| 746|Homo sapiens contactin associated pr... 31 2.0
BX649569-2|CAI12627.1| 380|Homo sapiens contactin associated pr... 31 2.0
BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated pr... 31 2.0
BC132737-1|AAI32738.1| 1207|Homo sapiens CNTNAP3 protein protein. 31 2.0
AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated pr... 31 2.0
AL353729-5|CAH72041.1| 292|Homo sapiens contactin associated pr... 31 2.0
AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated pr... 31 2.0
AL353729-2|CAH72037.1| 745|Homo sapiens contactin associated pr... 31 2.0
AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated pr... 31 2.0
AL162501-3|CAH70489.1| 292|Homo sapiens contactin associated pr... 31 2.0
AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated pr... 31 2.0
AL162501-1|CAH70485.1| 745|Homo sapiens contactin associated pr... 31 2.0
AK056833-1|BAB71293.1| 745|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK054645-1|BAB70782.1| 604|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK024257-1|BAB14861.1| 292|Homo sapiens protein ( Homo sapiens ... 31 2.0
AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecu... 31 2.0
AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein. 31 2.0
AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein. 30 4.5
>Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 2014 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 2058
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 2981 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 3025
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 2981 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 3025
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 2981 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 3025
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 2981 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 3025
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 2981 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 3025
>AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 2014 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 2058
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 2981 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 3025
>AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LASU1
protein.
Length = 3360
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASL 339
R+ + LG+ PP P+T+ S P + +P + + P F A+L
Sbjct: 1967 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVSPEFLAAL 2011
>CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>CR788268-4|CAI95048.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>CR788268-3|CAI95047.1| 380|Homo sapiens contactin associated
protein-like 3B protein.
Length = 380
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 173 REESIWGFPGNTNADSVVHYRLQPPF 198
>BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>BX664735-3|CAI95321.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>BX664735-2|CAI16325.1| 380|Homo sapiens contactin associated
protein-like 3B protein.
Length = 380
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 173 REESIWGFPGNTNADSVVHYRLQPPF 198
>BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>BX649569-3|CAI94998.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>BX649569-2|CAI12627.1| 380|Homo sapiens contactin associated
protein-like 3B protein.
Length = 380
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 173 REESIWGFPGNTNADSVVHYRLQPPF 198
>BC132737-1|AAI32738.1| 1207|Homo sapiens CNTNAP3 protein protein.
Length = 1207
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 37 REESIWGFPGNTNADSVVHYRLQPPF 62
>AL353729-5|CAH72041.1| 292|Homo sapiens contactin associated
protein-like 3 protein.
Length = 292
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 37 REESIWGFPGNTNADSVVHYRLQPPF 62
>AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>AL353729-2|CAH72037.1| 745|Homo sapiens contactin associated
protein-like 3 protein.
Length = 745
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 37 REESIWGFPGNTNADSVVHYRLQPPF 62
>AL162501-3|CAH70489.1| 292|Homo sapiens contactin associated
protein-like 3 protein.
Length = 292
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 37 REESIWGFPGNTNADSVVHYRLQPPF 62
>AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>AL162501-1|CAH70485.1| 745|Homo sapiens contactin associated
protein-like 3 protein.
Length = 745
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>AK056833-1|BAB71293.1| 745|Homo sapiens protein ( Homo sapiens
cDNA FLJ32271 fis, clone PROST1000536, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 745
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>AK054645-1|BAB70782.1| 604|Homo sapiens protein ( Homo sapiens
cDNA FLJ30083 fis, clone BGGI12001097, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 604
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>AK024257-1|BAB14861.1| 292|Homo sapiens protein ( Homo sapiens
cDNA FLJ14195 fis, clone NT2RP3001723, weakly similar to
Homo sapiens cell recognition molecule Caspr2 (CASPR2)
mRNA. ).
Length = 292
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 37 REESIWGFPGNTNADSVVHYRLQPPF 62
>AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecule
CASPR3 protein.
Length = 1288
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 125 REESIWGFPGNTNADSVVHYRLQPPF 150
>AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein.
Length = 1175
Score = 31.5 bits (68), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 463 RPEKIWGFXPQRGEDQLLHHRVQMPY 386
R E IWGF D ++H+R+Q P+
Sbjct: 173 REESIWGFPGNTNADSVVHYRLQPPF 198
>AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein.
Length = 3192
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 473 RKCTTREDLGVXPPKGGRPATSPSCPNAIRSPEASTILPSFKASLYSRL*MKNRTS 306
R+ + LG+ PP P+T+ S P + +P + +L +A R +N +S
Sbjct: 1815 RREVLQNQLGIRPPTRTAPSTNSSAPAVVGNPGVTEVLAQQRAEQQRRELAQNASS 1870
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,724,272
Number of Sequences: 237096
Number of extensions: 1428363
Number of successful extensions: 3669
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3669
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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