Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30189
         (821 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   3.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   6.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 479 SHKFTTSVTSTREEKKFXKGFFSM*PP*NVMDMPILW 369
           SH+F+T V+S    ++F +   +     N   M I W
Sbjct: 261 SHRFSTMVSSANRRREFIRSAITFIKQYNFDGMDIHW 297



 Score = 22.2 bits (45), Expect = 5.1
 Identities = 16/55 (29%), Positives = 19/55 (34%)
 Frame = -3

Query: 744  LTPQESTVCHAVCCAPSSWEHFFSSHMEGIGWNNWWSICCTKYWQTPLSGGATGT 580
            +TP    V   V    SS EH           + WWS   T  W T  +   T T
Sbjct: 1010 VTPAPPQVTTGVDTGASSTEHMHPDWTTKP--STWWSSTTTSPWWTTTTTRRTTT 1062


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 459 RSCEFVGSFFAIFYYSLLYEGLKYYRKAF 545
           ++C +V  FFAI   S+  +  K Y+K +
Sbjct: 7   KTCFYVAKFFAITPSSIYDKPTKLYQKLY 35


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 678 FSSHMEGIGWNNWWS 634
           F + ++G G  NWWS
Sbjct: 391 FRNAVQGTGIENWWS 405


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 678 FSSHMEGIGWNNWWS 634
           F + ++G G  NWWS
Sbjct: 392 FRNAVQGTGIENWWS 406


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 230 HGVHAQHGPYP 198
           +G H+QHG YP
Sbjct: 8   YGHHSQHGTYP 18


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 230 HGVHAQHGPYP 198
           +G H+QHG YP
Sbjct: 8   YGHHSQHGTYP 18


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 230 HGVHAQHGPYP 198
           +G H+QHG YP
Sbjct: 8   YGHHSQHGTYP 18


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 284 LRSPLIGIWWLYVLND 237
           L +  +GI WLYV ND
Sbjct: 541 LPASAVGIAWLYVDND 556


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 651 WNNWWSICCTKYWQTP 604
           +N WWS   + Y+Q P
Sbjct: 266 YNQWWSGPLSMYYQYP 281


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 144 SAPT*PRTRWTNIMNTTIWIWAMLGMNTM 230
           S+PT     +TN  N++IW  A +   T+
Sbjct: 201 SSPTIASATYTNSANSSIWSPASIDSFTL 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,882
Number of Sequences: 336
Number of extensions: 6169
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)