Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30189
         (821 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    26   1.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    26   1.6  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   2.8  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   2.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   6.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   6.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   8.6  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   8.6  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 409 CSHRETSWTCPYCGYCDHHGLKKCGHCDHSYLCCAQFCY 293
           C++     T P C  C +HGL K G   H   C  + C+
Sbjct: 29  CNNSLNPRTPPNCARCRNHGL-KIGLKGHKRYCKYRTCH 66


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 409 CSHRETSWTCPYCGYCDHHGLKKCGHCDHSYLCCAQFCY 293
           C++     T P C  C +HGL K G   H   C  + C+
Sbjct: 29  CNNSLNPRTPPNCARCRNHGL-KIGLKGHKRYCKYRTCH 66


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 409 CSHRETSWTCPYCGYCDHHGLKKCGHCDHSYLCCAQFC 296
           C++     T P C  C +HGL K G   H   C  + C
Sbjct: 29  CNNSLNPRTPPNCARCRNHGL-KIGLKGHKRYCKYRAC 65


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 409 CSHRETSWTCPYCGYCDHHGLKKCGHCDHSYLCCAQFC 296
           C++     T P C  C +HGL K G   H   C  + C
Sbjct: 29  CNNSLNPRTPPNCARCRNHGL-KIGLKGHKRYCKYRAC 65


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 389  MDMPILWLL*SPWPEKVWTL*SFISVLCTILLYDELRSPLIGIWW 255
            ++M +++L     P+++  L    +V    +LYDEL  P +   W
Sbjct: 1650 VNMKVIYLTDFGMPKQIVELKDTGTVALQEILYDELNRPAVRTKW 1694


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 389  MDMPILWLL*SPWPEKVWTL*SFISVLCTILLYDELRSPLIGIWW 255
            ++M +++L     P+++  L    +V    +LYDEL  P +   W
Sbjct: 1651 VNMKVIYLTDFGMPKQIVELKDTGTVALQEILYDELNRPAVRTKW 1695


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 665 WRELAGTIGGPSAA 624
           W   AG++GGPS+A
Sbjct: 225 WMSGAGSVGGPSSA 238


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 203 YPYCGVHDVRPSSTGLRRC 147
           Y YC VH+    S  L RC
Sbjct: 448 YTYCSVHEAPKVSGQLTRC 466


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,025,493
Number of Sequences: 2352
Number of extensions: 24886
Number of successful extensions: 49
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)