Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30188
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   1.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.1  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   4.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   6.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   6.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   6.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.4  

>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 172 ANYQDDQSRNGKQKIEAKHEVLYTGHSTFE 83
           A++ D     GK + + K+ V+YT H   E
Sbjct: 141 ADFADAPDAIGKTRTKDKYRVVYTDHQRVE 170


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -3

Query: 119 T*GTLHRTFHLRGPLLFN*ILPPNCITRE*NDSHQHQQS 3
           T G+  R F L+  L+ N ILPP   TR+   S Q+++S
Sbjct: 661 TIGSNQRNF-LKNALMSNNILPPESPTRD--KSKQNEKS 696


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 439 LKKTPPGNLPSPYASCNQR 383
           LKKT P  L S    CNQ+
Sbjct: 62  LKKTLPDALSSGCTKCNQK 80


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 440 KLAPERSITQYPVDKNVQKTIDIYKQ 517
           KL P+R    YP D+  +  +D  +Q
Sbjct: 632 KLYPDRRSMGYPFDRMPRNGVDTLQQ 657


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -2

Query: 192 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 88
           E  SAL      +     NRR+KQ  R     IPP
Sbjct: 285 EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 319


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -2

Query: 192 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 88
           E  SAL      +     NRR+KQ  R     IPP
Sbjct: 74  EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 108


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -2

Query: 192 EFISALMPTIRMINPVMANRRLKQNMRYFTQDIPP 88
           E  SAL      +     NRR+KQ  R     IPP
Sbjct: 74  EIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPP 108


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 440 KLAPERSITQYPVDKNVQKTIDIYKQ 517
           KL P+R    YP D+  +  +D  +Q
Sbjct: 631 KLYPDRRSMGYPFDRMPRDGVDTLQQ 656


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,031
Number of Sequences: 336
Number of extensions: 4495
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)