Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30188
(787 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 70 2e-14
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.4
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 7.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 9.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.8
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 70.1 bits (164), Expect = 2e-14
Identities = 33/94 (35%), Positives = 58/94 (61%)
Frame = +1
Query: 256 VGIIVFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDFPGGFF 435
+G I+F+++FFGCCGA++E+HCM ITF+ FLL I + ++AV + ++ + ++F
Sbjct: 58 LGSIIFVISFFGCCGAIRESHCMTITFASFLLFILLVQIAVAVYAFIVVKNDDNF-RNIS 116
Query: 436 LKIGT*TLHYSISGRQERPEDH*YLQTDLQCCGI 537
K Y ++ + D ++Q +LQCCG+
Sbjct: 117 EKYQEIFNGYFLNSESKDFID--FIQKNLQCCGV 148
Score = 37.9 bits (84), Expect = 1e-04
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 92 GMSCVKYLMFCFNLLFAITGLIILIVGI 175
GM +KYL+F FN +FA+ GL IL +G+
Sbjct: 4 GMGMIKYLLFIFNFVFAVCGLGILTLGV 31
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 97 VLCKVPHVLLQ 129
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 97 VLCKVPHVLLQ 129
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 97 VLCKVPHVLLQ 129
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 97 VLCKVPHVLLQ 129
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 97 VLCKVPHVLLQ 129
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 97 VLCKVPHVLLQ 129
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 7.4
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -1
Query: 49 IVLLGNKTIHTSTN 8
+V+ NK++HT+TN
Sbjct: 76 VVIARNKSMHTATN 89
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 97 VLCKVPHVLLQ 129
+LC+ PH+++Q
Sbjct: 519 ILCRAPHIIVQ 529
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +1
Query: 97 VLCKVPHVLLQ 129
+LC+ PH+++Q
Sbjct: 519 ILCRAPHIIVQ 529
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 426 PREIFQVRMLHVTSD 382
P+E V+MLHV SD
Sbjct: 94 PKEYGGVKMLHVPSD 108
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 426 PREIFQVRMLHVTSD 382
P+E V+MLHV SD
Sbjct: 94 PKEYGGVKMLHVPSD 108
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 9.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 435 KKPPREIFQVRMLHVTSD 382
K P+E V MLHV SD
Sbjct: 87 KWDPKEYGGVEMLHVPSD 104
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 9.8
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 408 LGRFPGGVFFKNWHLNAPLLN 470
+ + GVF+KN+ LN ++
Sbjct: 362 MANYDRGVFYKNYLLNVSFID 382
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 9.8
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 408 LGRFPGGVFFKNWHLNAPLLN 470
+ + GVF+KN+ LN ++
Sbjct: 452 MANYDRGVFYKNYLLNVSFID 472
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,867
Number of Sequences: 438
Number of extensions: 5451
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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